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The conformational and dynamical properties of active self-propelled filaments/polymers are investigated in the presence of hydrodynamic interactions by both, Brownian dynamics simulations and analytical theory. Numerically, a discrete…

软凝聚态物质 · 物理学 2020-08-04 Aitor Martin-Gomez , Thomas Eisenstecken , Gerhard Gompper , Roland G. Winkler

The role of active stress on the conformational dynamics of a polymer has drawn significant interest due to its potential applications in understanding the energy landscape of protein structures, buckling of biopolymers, genomic spatial…

软凝聚态物质 · 物理学 2025-09-23 Arindam Panda , Sunil P Singh

While the dynamics of polymer chains in equilibrium media is well understood by now, the polymer dynamics in active non-equilibrium environments can be very different. Here we study the dynamics of polymers in a viscous medium containing…

软凝聚态物质 · 物理学 2017-06-23 Jaeoh Shin , Andrey G. Cherstvy , Won Kyu Kim , Vasily Zaburdaev

We study an intriguing new type of self-assembled active colloidal polymer system in 3D. It is obtained from a suspension of Janus particles in an electric field that induces parallel dipoles in the particles as well as self-propulsion in…

软凝聚态物质 · 物理学 2024-04-19 Xichen Chao , Katherine Skipper , C. Patrick Royall , Silke Henkes , Tanniemola B. Liverpool

This work investigates the effects of tangent polar activity on the conformational and dynamic properties of entangled polymer melts through Langevin molecular dynamics simulations. We examine systems composed of all self-propelled,…

软凝聚态物质 · 物理学 2024-11-19 Javier Oller-Iscar , Andrés R. Tejedor , Marisol Ripoll , Jorge Ramírez

By quantitative studies of statistics of polymer stretching in a random flow and of a flow field we demonstrate that the stretching of polymer molecules in a 3D random flow occurs rather sharply via the coil-stretch transition at the value…

混沌动力学 · 物理学 2009-11-10 S. Gerashchenko , C. Chevallard , V. Steinberg

The non-equilibrium structural and dynamical properties of a flexible polymer tethered to a reflecting wall and subject to oscillatory linear flow are studied by numerical simulations. Polymer is confined in two dimensions and is modeled as…

软凝聚态物质 · 物理学 2024-07-30 A. Lamura

We study the dynamics of polymer chains in a bath of self-propelled particles (SPP) by extensive Langevin dynamics simulations in a two dimensional system. Specifically, we analyse the polymer looping properties versus the SPP activity and…

软凝聚态物质 · 物理学 2016-09-26 J. Shin , A. G. Cherstvy , W. K. Kim , R. Metzler

We study the dynamics and conformation of polymers composed by active monomers. By means of Brownian dynamics simulations we show that when the direction of the self-propulsion of each monomer is aligned with the backbone, the polymer…

软凝聚态物质 · 物理学 2018-11-28 Valentino Bianco , Emanuele Locatelli , Paolo Malgaretti

Understanding the role of self-propulsion on the conformational properties of active filamentous objects has relevance in biology. In this context, we consider a flexible bead-spring model polymer for which along with both attractive and…

软凝聚态物质 · 物理学 2022-02-22 Subhajit Paul , Suman Majumder , Wolfhard Janke

The conformational and dynamical properties of active Brownian polymers embedded in a fluid depend on the nature of the driving mechanism, e.g., self-propulsion or external actuation of the monomers. Implementations of self-propelled and…

软凝聚态物质 · 物理学 2022-01-24 Judit Clopés Llahí , Aitor Martín-Gómez , Gerhard Gompper , Roland G. Winkler

By means of Brownian dynamics simulations we study the steady-state dynamic properties of a flexible active polymer in a poor solvent condition. Our results show that the effective diffusion constant of the polymer $D_{\rm eff}$ gets…

软凝聚态物质 · 物理学 2023-08-29 Suman Majumder , Subhajit Paul , Wolfhard Janke

The conformation of a long linear polymer dissolved in fluid and exposed to an extensional flow is well-known to exhibit a "coil-stretch" transition, which for sufficiently long chains can lead to bistability. The present work reports…

软凝聚态物质 · 物理学 2022-02-09 Yijiang Yu , Michael D. Graham

Self-propelled particles possessing permanent magnetic dipole moments occur naturally in magnetotactic bacteria and in man-made systems like active colloids or micro-robots. Yet, the interplay between self-propulsion and anisotropic…

软凝聚态物质 · 物理学 2024-04-29 Maria Kelidou , Mohammad Fazelzadeh , Baptiste Parage , Sara Jabbari Farouji

Active processes in living systems generate nonequilibrium forces that deform embedded passive macromolecules. To understand how such dynamics influence polymer conformation, we study a flexible passive chain in an active nematic fluid.…

软凝聚态物质 · 物理学 2025-09-30 Zahra K. Valei , Davide Marenduzzo , Tyler N. Shendruk

Based on Brownian Dynamics (BD) simulations, we study the dynamical self-assembly of active Brownian particles with dipole-dipole interactions, stemming from a permanent point dipole at the particle center. The propulsion direction of each…

软凝聚态物质 · 物理学 2021-06-09 Guo-Jun Liao , Carol K. Hall , Sabine H. L. Klapp

We present a tube model for the Brownian dynamics of associating polymers in extensional flow. In linear response, the model confirms the analytical predictions for the sticky diffusivity by Leibler- Rubinstein-Colby theory. Although a…

软凝聚态物质 · 物理学 2021-02-10 Charley Schaefer , Tom C. B. McLeish

Inspired by recent experiments on chromosomal dynamics, we introduce an exactly solvable model for the interaction between a flexible polymer and a set of motor-like enzymes. The enzymes can bind and unbind to specific sites of the polymer…

软凝聚态物质 · 物理学 2019-04-03 Stefanie Put , Takahiro Sakaue , Carlo Vanderzande

We study the conformation and dynamics of a single polymer chain that is pulled by a constant force applied at its one end with the other end free. Such a situation is relevant to the growing technology of manipulating individual…

软凝聚态物质 · 物理学 2015-06-04 Takahiro Sakaue , Takuya Saito , Hirofumi Wada

We study the structural and dynamical behaviors of a diblock copolymer chain in a bath of active Brownian particles (ABPs) by extensive Brownian dynamics simulation in a two-dimensional model system. Specifically, the A block of chain is…

软凝聚态物质 · 物理学 2019-05-22 Yi-qi Xia , Zhuang-lin Shen , Wen-de Tian , Kang Chen , Yu-qiang Ma
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