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The Gaussian graphical model is a widely used tool for learning gene regulatory networks with high-dimensional gene expression data. Most existing methods for Gaussian graphical models assume that the data are homogeneous, i.e., all samples…

统计方法学 · 统计学 2018-05-08 Bochao Jia , Faming Liang

Small subgraphs (graphlets) are important features to describe fundamental units of a large network. The calculation of the subgraph frequency distributions has a wide application in multiple domains including biology and engineering.…

机器学习 · 计算机科学 2022-07-15 Zhongren Chen , Xinyue Xu , Shengyi Jiang , Hao Wang , Lu Mi

Graph Neural Networks (GNNs) have been widely used for modeling graph-structured data. With the development of numerous GNN variants, recent years have witnessed groundbreaking results in improving the scalability of GNNs to work on static…

机器学习 · 计算机科学 2022-06-06 Yanping Zheng , Hanzhi Wang , Zhewei Wei , Jiajun Liu , Sibo Wang

Recent advances in graph convolutional networks have significantly improved the performance of chemical predictions, raising a new research question: "how do we explain the predictions of graph convolutional networks?" A possible approach…

Inference in Gaussian process (GP) models is computationally challenging for large data, and often difficult to approximate with a small number of inducing points. We explore an alternative approximation that employs stochastic inference…

机器学习 · 统计学 2019-05-28 Jiaxin Shi , Mohammad Emtiyaz Khan , Jun Zhu

We study the problem of learning latent variables in Gaussian graphical models. Existing methods for this problem assume that the precision matrix of the observed variables is the superposition of a sparse and a low-rank component. In this…

机器学习 · 统计学 2017-07-12 Mohammadreza Soltani , Chinmay Hegde

Graph Neural Networks (GNNs) have emerged as powerful tools for supervised machine learning over graph-structured data, while sampling-based node representation learning is widely utilized in unsupervised learning. However, scalability…

机器学习 · 计算机科学 2024-07-23 Vipul Gupta , Xin Chen , Ruoyun Huang , Fanlong Meng , Jianjun Chen , Yujun Yan

Training large scale Graph Neural Networks (GNNs) requires significant computational resources, and the process is highly data-intensive. One of the most effective ways to reduce resource requirements is minibatch training coupled with…

机器学习 · 计算机科学 2024-09-10 Muhammed Fatih Balin , Dominique LaSalle , Ümit V. Çatalyürek

Recent papers have formulated the problem of learning graphs from data as an inverse covariance estimation with graph Laplacian constraints. While such problems are convex, existing methods cannot guarantee that solutions will have specific…

机器学习 · 统计学 2018-05-09 Eduardo Pavez , Hilmi E. Egilmez , Antonio Ortega

We propose a fast approximate algorithm for large graph matching. A new projected fixed-point method is defined and a new doubly stochastic projection is adopted to derive the algorithm. Previous graph matching algorithms suffer from high…

计算机视觉与模式识别 · 计算机科学 2012-08-13 Yao Lu , Kaizhu Huang , Cheng-Lin Liu

The progress in hyperbolic neural networks (HNNs) research is hindered by their absence of inductive bias mechanisms, which are essential for generalizing to new tasks and facilitating scalable learning over large datasets. In this paper,…

机器学习 · 计算机科学 2023-10-31 Nurendra Choudhary , Nikhil Rao , Chandan K. Reddy

Interpretable graph learning is in need as many scientific applications depend on learning models to collect insights from graph-structured data. Previous works mostly focused on using post-hoc approaches to interpret pre-trained models…

机器学习 · 计算机科学 2022-06-20 Siqi Miao , Miaoyuan Liu , Pan Li

We address the problem of prediction of multivariate data process using an underlying graph model. We develop a method that learns a sparse partial correlation graph in a tuning-free and computationally efficient manner. Specifically, the…

机器学习 · 统计学 2018-11-19 Arun Venkitaraman , Dave Zachariah

Graphs are a fundamental abstraction for modeling relational data. However, graphs are discrete and combinatorial in nature, and learning representations suitable for machine learning tasks poses statistical and computational challenges. In…

机器学习 · 统计学 2019-05-16 Aditya Grover , Aaron Zweig , Stefano Ermon

We study the problem of learning directed acyclic graphs from continuous observational data, generated according to a linear Gaussian structural equation model. State-of-the-art structure learning methods for this setting have at least one…

统计方法学 · 统计学 2025-04-03 Tong Xu , Armeen Taeb , Simge Küçükyavuz , Ali Shojaie

Graphs are widely used for representing pairwise interactions in complex systems. Since such real-world graphs are large and often evergrowing, sampling a small representative subgraph is indispensable for various purposes: simulation,…

社会与信息网络 · 计算机科学 2022-02-08 Minyoung Choe , Jaemin Yoo , Geon Lee , Woonsung Baek , U Kang , Kijung Shin

The chain graph model admits both undirected and directed edges in one graph, where symmetric conditional dependencies are encoded via undirected edges and asymmetric causal relations are encoded via directed edges. Though frequently…

统计方法学 · 统计学 2024-01-29 Ruixuan Zhao , Haoran Zhang , Junhui Wang

Exploring statistics of locally connected subgraph patterns (also known as network motifs) has helped researchers better understand the structure and function of biological and online social networks (OSNs). Nowadays the massive size of…

社会与信息网络 · 计算机科学 2014-03-28 Pinghui Wang , John C. S. Lui , Bruno Ribeiro , Don Towsley , Junzhou Zhao , Xiaohong Guan

Many real-world networks exhibit correlations between the node degrees. For instance, in social networks nodes tend to connect to nodes of similar degree. Conversely, in biological and technological networks, high-degree nodes tend to be…

离散数学 · 计算机科学 2015-09-30 Kevin E. Bassler , Charo I. Del Genio , Péter L. Erdős , István Miklós , Zoltán Toroczkai

Challenging computer vision tasks, in particular semantic image segmentation, require large training sets of annotated images. While obtaining the actual images is often unproblematic, creating the necessary annotation is a tedious and…

计算机视觉与模式识别 · 计算机科学 2015-04-29 Alexander Kolesnikov , Christoph H. Lampert