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The COVID-19 pandemic has been characterised by multiple waves of transmission driven by interventions and emerging variants, challenging epidemic models that assume gradually evolving transmission dynamics. We propose a class of…

应用统计 · 统计学 2026-05-05 Patrick Aschermayr , Konstantinos Kalogeropoulos , Nikolaos Demiris

We consider a continuous-time Markov chain model of SIR disease dynamics with two levels of mixing. For this so-called stochastic households model, we provide two methods for inferring the model parameters---governing within-household…

种群与进化 · 定量生物学 2018-02-07 James N. Walker , Joshua V. Ross , Andrew J. Black

We present a probabilistic graphical model formulation for the graph clustering problem. This enables to locally represent uncertainty of image partitions by approximate marginal distributions in a mathematically substantiated way, and to…

计算机视觉与模式识别 · 计算机科学 2016-01-12 Jörg Hendrik Kappes , Paul Swoboda , Bogdan Savchynskyy , Tamir Hazan , Christoph Schnörr

This paper addresses statistical modelling and forecasting of key indicators describing the severity of a developing pandemic, using routinely reported daily counts of infections, hospitalizations, deaths (both in and out of hospital), and…

The COVID-19 pandemic has created unprecedented challenges worldwide. Strained healthcare providers make difficult decisions on patient triage, treatment and care management on a daily basis. Policy makers have imposed social distancing…

In the context of epidemiology, policies for disease control are often devised through a mixture of intuition and brute-force, whereby the set of logically conceivable policies is narrowed down to a small family described by a few…

种群与进化 · 定量生物学 2021-10-04 Miguel Navascues , Costantino Budroni , Yelena Guryanova

For the description of a pandemic mathematical models could be interesting. Both for physicians and politicians as a base for decisions to treat the disease. The responsible estimation of parameters is a main issue of mathematical pandemic…

种群与进化 · 定量生物学 2020-04-15 Günter Bärwolff

Using the continuous-time susceptible-infected-susceptible (SIS) model on networks, we investigate the problem of inferring the class of the underlying network when epidemic data is only available at population-level (i.e. the number of…

种群与进化 · 定量生物学 2019-12-05 F. Di Lauro , J. -C. Croix , M. Dashti , L. Berthouze , I. Z. Kiss

The COVID-19 pandemic has highlighted the need for quantitative modeling and analysis to understand real-world disease dynamics. In particular, post hoc analyses using compartmental models offer valuable insights into the effectiveness of…

机器学习 · 计算机科学 2025-10-09 Phillip Rothenbeck , Sai Karthikeya Vemuri , Niklas Penzel , Joachim Denzler

Modelling epidemic events such as COVID-19 cases in both time and space dimensions is an important but challenging task. Building on in-depth review and assessment of two popular graph neural network (GNN)-based regional epidemic…

统计计算 · 统计学 2025-11-20 Xiangxin Kong , Hang Wang , Yutong Li , Yanghao Chen , Zudi Lu

This paper extends the canonical model of epidemiology, the SIRD model, to allow for time-varying parameters for real-time measurement and prediction of the trajectory of the Covid-19 pandemic. Time variation in model parameters is captured…

计量经济学 · 经济学 2023-02-01 Cem Cakmakli , Yasin Simsek

The novel COVID-19 pandemic is a current, major global health threat. Up till now, there is no fully approved pharmacological treatment or a vaccine. In this study, simple mathematical models were employed to examine the dynamics of…

物理与社会 · 物理学 2020-12-25 Ahmed S. Elgazzar

We study the problem of containing epidemic spreading processes in temporal networks. We specifically focus on the problem of finding a resource allocation to suppress epidemic infection, provided that an empirical time-series data of…

社会与信息网络 · 计算机科学 2019-04-16 Masaki Ogura , Junichi Harada

COVID-19 has resulted in a public health global crisis. The pandemic control necessitates epidemic models that capture the trends and impacts on infectious individuals. Many exciting models can implement this but they lack practical…

计算机与社会 · 计算机科学 2021-04-13 Ou Deng , Kiichi Tago , Qun Jin

We study the Susceptible-Infectious-Susceptible (SIS) model on arbitrary networks. The well-established pair approximation treats neighboring pairs of nodes exactly while making a mean field approximation for the rest of the network. We…

社会与信息网络 · 计算机科学 2026-05-05 George Cantwell , Cristopher Moore

We propose a new paradigm to design a network-based self-adaptive epidemic model that relies on the interplay between the network and its line graph. We implement this proposal on a Susceptible-Infected-Susceptible model in which both nodes…

适应与自组织系统 · 物理学 2024-03-05 Paolo Bartesaghi , Gian Paolo Clemente , Rosanna Grassi

The expected number of secondary infections arising from each index case, referred to as the reproduction or $R$ number, is a vital summary statistic for understanding and managing epidemic diseases. There are many methods for estimating…

应用统计 · 统计学 2022-02-22 Joe Meagher , Nial Friel

A pandemic is the spread of a disease across large regions, and can have devastating costs to the society in terms of health, economic and social. As such, the study of effective pandemic mitigation strategies can yield significant positive…

人工智能 · 计算机科学 2024-10-02 Ari Gestetner , Buser Say

This document is the Part IV of the book 'Stochastic Epidemic Models with Inference' edited by Tom Britton and Etienne Pardoux. It is written by Catherine Lar\'edo, with the contribution of Viet Chi Tran for the Chapter 4. Epidemic data…

概率论 · 数学 2020-04-17 Catherine Larédo , Viet Chi Tran

We propose a deterministic SAIVRD model and a stochastic SARV model of the epidemic COVID-19 involving asymptomatic infections and vaccinations to conduct data forecasts using time-dependent parameters. The forecast by our deterministic…

种群与进化 · 定量生物学 2022-09-28 Bo-Sheng Chen , Zong-Ying Wu , Yen-Jia Chen , Jann-Long Chern