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A common theme among the proposed models for network epidemics is the assumption that the propagating object, i.e., a virus or a piece of information, is transferred across the nodes without going through any modification or evolution.…

物理与社会 · 物理学 2019-11-05 Rashad Eletreby , Yong Zhuang , Kathleen M. Carley , Osman Yağan , H. Vincent Poor

In most models of the spread of disease over contact networks it is assumed that the probabilities per unit time of disease transmission and recovery from disease are constant, implying exponential distributions of the time intervals for…

物理与社会 · 物理学 2010-07-23 Brian Karrer , M. E. J. Newman

Compartmental models of epidemics are widely used to forecast the effects of communicable diseases such as COVID-19 and to guide policy. Although it has long been known that such processes take place on social networks, the assumption of…

物理与社会 · 物理学 2024-03-14 Samuel Johnson

Mathematical disease modelling has long operated under the assumption that any one infectious disease is caused by one transmissible pathogen spreading among a population. This paradigm has been useful in simplifying the biological reality…

种群与进化 · 定量生物学 2021-06-02 Blake J. M. Williams , Guillaume St-Onge , Laurent Hébert-Dufresne

We study the spreading of an infection within an SIS epidemiological model on a network. Susceptible agents are given the opportunity of breaking their links with infected agents, and reconnecting those links with the rest of the…

物理与社会 · 物理学 2007-07-11 Damian H. Zanette

We study the dynamics of a spatially structured model of worldwide epidemics and formulate predictions for arrival times of the disease at any city in the network. The model is comprised of a system of ordinary differential equations…

斑图形成与孤子 · 物理学 2018-02-14 Lawrence M. Chen , Matt Holzer , Anne Shapiro

Whole genome sequencing of pathogens from multiple hosts in an epidemic offers the potential to investigate who infected whom with unparalleled resolution, potentially yielding important insights into disease dynamics and the impact of…

We investigate the time evolution of disease spread on a network by using the concept of generations. We derive a set of equations, which can be used to determine the average epidemic size. We find a very good agreement between the…

统计力学 · 物理学 2010-05-24 B. Davoudi , F. Brauer , B. Pourbohloul

We study two simple mathematical models of the epidemic. At first, we study the repetitive infection spreading in a simplified SIRS model including the effect of the decay of the acquired immune. The model is an intermediate model of the…

种群与进化 · 定量生物学 2024-03-13 Hidetsugu Sakaguchi , Keito Yamasaki

Mathematical models of infectious diseases, which are in principle analytically tractable, use two general approaches. The first approach, generally known as compartmental modeling, addresses the time evolution of disease propagation at the…

种群与进化 · 定量生物学 2010-09-16 Pierre-André Noël , Bahman Davoudi , Robert C. Brunham , Louis J. Dubé , Babak Pourbohloul

Human to human transmissible infectious diseases spread in a population using human interactions as its transmission vector. The early stages of such an outbreak can be modeled by a graph whose edges encode these interactions between…

种群与进化 · 定量生物学 2020-06-11 Goncalo Oliveira

In this research, we study the propagation patterns of epidemic diseases such as the COVID-19 coronavirus, from a mathematical modeling perspective. The study is based on an extensions of the well-known susceptible-infected-recovered (SIR)…

种群与进化 · 定量生物学 2021-01-01 Reza Sameni

Infectious disease superspreading caused by heterogeneity in contact behavior has been observed to be an important determinant of epidemic dynamics and size in both empirical and theoretical settings. However, it has also been observed that…

Many models of virus propagation in Computer Networks inspired by {\bf SIS,SIR,}\\ {\bf SEIR}, etc. epidemic disease propagation mathematical models that can be found in the epidemiology field have been proposed in the last two decades. The…

最优化与控制 · 数学 2021-01-05 Carlos Rodriguez Lucatero

Forecasting the change in the distribution of viral variants is crucial for therapeutic design and disease surveillance. This task poses significant modeling challenges due to the sharp differences in virus distributions across…

机器学习 · 计算机科学 2025-04-24 Wenxian Shi , Menghua Wu , Regina Barzilay

The SIR model is used extensively in the field of epidemiology, in particular, for the analysis of communal diseases. One problem with SIR and other existing models is that they are tailored to random or Erdos type networks since they do…

社会与信息网络 · 计算机科学 2014-10-22 M. S. S. Khan

We study the spread of discrete-time epidemics over arbitrary networks for well-known propagation models, namely SIS (susceptible-infected-susceptible), SIR (susceptible-infected-recovered), SIRS (susceptible-infected-recovered-susceptible)…

社会与信息网络 · 计算机科学 2016-10-03 Navid Azizan Ruhi , Hyoung Jun Ahn , Babak Hassibi

We present a modelling framework for the spreading of epidemics on temporal networks from which both the individual-based and pair-based models can be recovered. The proposed temporal pair-based model that is systematically derived from…

物理与社会 · 物理学 2020-11-17 Rory Humphries , Kieran Mulchrone , Jamie Tratalos , Simon More , Philipp Hövel

The present work shows that it is possible to analytically solve a general model to explain the transmission dynamics of SARS-CoV-2. First, the within-host model is described, and later a between-host model, where the coupling between them…

种群与进化 · 定量生物学 2023-08-07 Raul Isea

Epidemic models currently play a central role in our attempts to understand and control infectious diseases. Here, we derive a model for the diffusion limit of stochastic susceptible-infectious-removed (SIR) epidemic dynamics on a…

种群与进化 · 定量生物学 2013-09-30 Matthew Graham , Thomas House