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Dynamically crosslinked semiflexible biopolymers such as the actin cytoskeleton govern the mechanical behavior of living cells. Semiflexible biopolymers nonlinearly stiffen in response to mechanical loads, whereas the crosslinker dynamics…

软凝聚态物质 · 物理学 2019-06-05 Yuval Mulla , F. C. MacKintosh , Gijsje H. Koenderink

Cytoskeletal networks of biopolymers are cross-linked by a variety of proteins. Experiments have shown that dynamic cross-linking with physiological linker proteins leads to complex stress relaxation and enables network flow at long times.…

The mechanical properties of cells are dominated by the cytoskeleton, an interconnected network of long elastic filaments. The connections between the filaments are provided by crosslinking proteins, which constitute, next to the filaments,…

软凝聚态物质 · 物理学 2012-10-09 Claus Heussinger

The non-linear stress-strain relation for crosslinked polymer networks is studied using molecular dynamics simulations. Previously we demonstrated the importance of trapped entanglements in determining the elastic and relaxational…

软凝聚态物质 · 物理学 2009-10-31 Gary S. Grest , Mathias Puetz , Kurt Kremer , Ralf Everaers

We propose a theoretical framework for dealing with a transient polymer network undergoing small deformations, based on the rate of breaking and re-forming of network crosslinks and the evolving elastic reference state. In this framework,…

软凝聚态物质 · 物理学 2016-04-27 Fanlong Meng , Robyn H. Pritchard , Eugene M. Terentjev

While polymer solutions lack the mechanical stability only transiently cross-linked networks can fulfill the competing requirements of structural stability and maximal energy dissipation. Here, we show that transient cross-links entail…

软凝聚态物质 · 物理学 2009-11-13 O. Lieleg , M. M. A. E. Claessens , Y. Luan , A. R. Bausch

We introduce a mathematical model for the mechanical behaviour of the eukaryotic cell cytoskeleton. This discrete model involves a regular array of pre-stressed protein filaments that exhibit resistance to enthalpic stretching, joined at…

定量方法 · 定量生物学 2023-09-06 J. Köry , N. A. Hill , X. Y. Luo , P. S. Stewart

Transient networks comprised of polymers connected by short-lived bonds are a common design theme for both biological and synthetic materials. Transient bonds can provide mechanical rigidity, while still allowing for visco-elastic flows on…

软凝聚态物质 · 物理学 2019-01-02 Yuval Mulla , Gijsje H. Koenderink

We propose a statistical model of a large random network with high connectivity in order to describe the behavior of {\it E.\,coli} cells after exposure to acute stress. The building blocks of this network are feedback cycles typical of the…

无序系统与神经网络 · 物理学 2022-02-22 S. Reich , S. Maoz , Y. Kaplan , H. Rappeport , N. Q. Balaban , O. Agam

The complexity of the cells can be described and understood by a number of networks such as protein-protein interaction, cytoskeletal, organelle, signalling, gene transcription and metabolic networks. All these networks are highly dynamic…

分子网络 · 定量生物学 2007-07-26 Mate S. Szalay , Istvan A. Kovacs , Tamas Korcsmaros , Csaba Bode , Peter Csermely

We study the structure and dynamics of a transient network composed of droplets of microemulsion connected by telechelic polymers. The polymer induces a bridging attraction between droplets without changing their shape. A viscoelastic…

软凝聚态物质 · 物理学 2009-10-31 F. Molino , J. Appell , M. Filali , E. Michel , G. Porte , S. Mora , E. Sunyer

The mechanics of cells is strongly affected by molecular motors that generate forces in the cellular cytoskeleton. We develop a model for cytoskeletal networks driven out of equilibrium by molecular motors exerting transient contractile…

软凝聚态物质 · 物理学 2009-11-13 Fred C. MacKintosh , Alex J. Levine

Gels made of telechelic polymers connected by reversible crosslinkers are a versatile design platform for biocompatible viscoelastic materials. Their linear response to a step strain displays a fast, near-exponential relaxation when using…

We describe a model of cytoskeletal mechanics based on the force-induced conformational change of protein cross-links in a stressed polymer network. Slow deformation of simulated networks containing cross-links that undergo repeated, serial…

生物物理 · 物理学 2007-05-23 Brenton D. Hoffman , Gladys Massiera , John C. Crocker

We suggest a simple model for reversible cross-links, binding and unbinding to/from a network of semiflexible polymers. The resulting frequency dependent response of the network to an applied shear is calculated via Brownian dynamics…

软凝聚态物质 · 物理学 2018-08-17 Henry Amuasi , Andreas Fischer , Annette Zippelius , Claus Heussinger

Live cells have ambiguous mechanical properties. They were often described as either elastic solids or viscoelastic fluids and have recently been classified as soft glassy materials characterized by weak power-law rheology. Nonlinear…

软凝聚态物质 · 物理学 2013-05-30 Lars Wolff , Klaus Kroy

In cells, cytoskeletal filament networks are responsible for cell movement, growth, and division. Filaments in the cytoskeleton are driven and organized by crosslinking molecular motors. In reconstituted cytoskeletal systems, motor activity…

We propose a mechanism of cell motility which is based on contraction and does not require protrusion. The contraction driven translocation of a cell is due to internal flow of the cytoskeleton generated by molecular motors. Each motor…

生物物理 · 物理学 2013-02-19 Pierre Recho , Thibault Putelat , Lev Truskinovsky

The cytoskeleton is an inhomogeneous network of semi-flexible filaments, which are involved in a wide variety of active biological processes. Although the cytoskeletal filaments can be very stiff and embedded in a dense and cross-linked…

生物物理 · 物理学 2019-05-24 Ines Weber , Cécile Appert-Rolland , Grégory Schehr , Ludger Santen

We present a theoretical framework for the linear and nonlinear visco-elastic properties of reversibly crosslinked networks of semiflexible polymers. In contrast to affine models where network strain couples to the polymer end-to-end…

软凝聚态物质 · 物理学 2016-07-06 Jan Plagge , Andreas Fischer , Claus Heussinger
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