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相关论文: Minimal Lattice Model of Lipid Membranes with Liqu…

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We use a lattice model of a ternary mixture containing saturated and unsaturated lipids with cholesterol (Chol), to study the structural properties characterizing the coexistence between the liquid-disordered and liquid-ordered phases.…

软凝聚态物质 · 物理学 2023-10-24 Tanmoy Sarkar , Oded Farago

Many ternary mixtures composed of saturated and unsaturated lipids with cholesterol (Chol) exhibit a region of coexistence between liquid-disordered $(L_d)$ and liquid-ordered $(L_o)$ domains, bearing some similarities to lipid rafts in…

软凝聚态物质 · 物理学 2024-11-26 Subhadip Basu , Oded Farago

Much of our understanding of the physical properties of raft domains in biological membranes, and some insight into the mechanisms underlying their formation stem from atomistic simulations of simple model systems, especially ternary…

软凝聚态物质 · 物理学 2023-03-07 Tanmoy Sarkar , Oded Farago

Simulation of a multicomponent lipid bilayer having a fixed percentage of cholesterol is done to study phase transition leading to domain formation. The concept of random lattice has been used in simulation to account for the coupling…

软凝聚态物质 · 物理学 2015-06-25 Srilekha Banerjee , Jayashree Saha

The cell membrane is inherently asymmetric and heterogeneous in its composition, a feature that is crucial for its function. Using atomistic molecular dynamics simulations, the physical properties of a 3-component asymmetric mixed lipid…

软凝聚态物质 · 物理学 2012-04-04 Anirban Polley , Satyavani Vemparala , Madan Rao

Membrane proteins often form dimers and higher-order oligomers whose stability and spatial organization depend sensitively on their lipid environment. To investigate the physical principles underlying this coupling, we employ a lattice…

软凝聚态物质 · 物理学 2026-05-21 Subhadip Basu , Oded Farago

Cholesterol (CHOL) is one of the most important components of plasma membranes of higher cells and one of the main factors for the formation of (nano)domains. In this work, molecular dynamics simulations of mixtures of CHOL with DPPC…

生物物理 · 物理学 2022-08-11 Fabian Keller , Andreas Heuer

We report on atomistic simulations of DPPC lipid monolayers using the CHARMM36 lipid force field and four-point OPC water model. The entire two-phase region where domains of the `liquid-condensed' (LC) phase coexist with domains of the…

软凝聚态物质 · 物理学 2019-03-18 S. Panzuela , D. P. Tieleman , L. Mederos , E. Velasco

Liposomes that achieve a heterogeneous and spatially organized surface through phase separation have been recognized to be a promising platform for delivery purposes. However, their design and optimization through experimentation can be…

软凝聚态物质 · 物理学 2021-11-05 Y. Wang , Y. Palzhanov , A. Quaini , M. Olshanskii , S. Majd

Water contained within biological membranes plays a critical role in maintaining the separation between intracellular and extracellular environments and facilitating biochemical processes. Variations in membrane composition and temperature…

A molecular model is proposed of a bilayer consisting of fully saturated DPPC and mono unsaturated DOPC. The model not only encompasses the constant density within the hydrophobic core of the bilayer, but also the tendency of chain segments…

生物物理 · 物理学 2009-11-10 R. Elliott , K. Katsov , M. Schick , I. Szleifer

Cellular membranes are a heterogeneous mix of lipids, proteins and small molecules. Special groupings of saturated lipids and cholesterol form a liquid-ordered phase, known as `lipid rafts,' serving as platforms for signaling, trafficking…

定量方法 · 定量生物学 2015-05-13 Tristan S. Ursell , William S. Klug , Rob Phillips

Lipid monolayers and bilayers have been used as experimental models for the investigation of membrane thermal transitions. The main transition takes place near ambient temperatures for several lipids and reflects the order-disorder…

生物物理 · 物理学 2015-06-17 Henrique S. Guidi , Vera B. Henriques

A lattice model for binary mixture of lipids and water is introduced and investigated. The orientational degrees of freedom of the amphiphilic molecules are taken into account in the same way as in the model for oil-water-surfactant…

软凝聚态物质 · 物理学 2014-07-04 Alina Ciach , Jakub Pękalski

The molecular arrangement of lipids and proteins within biomembranes and monolayers gives rise to complex film morphologies as well as regions of distinct electrical surface potential, topographical and electrostatic nanoscale domains. To…

软凝聚态物质 · 物理学 2016-11-28 Elizabeth Drolle , W. F. D. Bennett , K. Hammond , Edward Lyman , Mikko Karttunen , Zoya Leonenko

Rafts, or functional domains, are transient nano- or mesoscopic structures in the plasma membrane and are thought to be essential for many cellular processes such as signal transduction, adhesion, trafficking and lipid/protein sorting.…

By means of lattice-based Monte Carlo simulations, we address properties of two-component lipid membranes on the experimentally relevant spatial scales of order of a micrometer and time intervals of order of a second, using DMPC/DSPC lipid…

生物物理 · 物理学 2018-12-26 Jens Ehrig , Eugene P. Petrov , Petra Schwille

Cholesterol (CHOL) drives lipid segregation and is thus a key player for the formation of lipid rafts and followingly for the ability of a cell to, e.g., enable selective agglomeration of proteins. The lipid segregation is driven by…

生物物理 · 物理学 2021-03-26 Fabian Keller , Andreas Heuer

We advanced a previously reported model for the \textit{in situ} scattering data analysis of coexisting lipid domains in free-floating multilamellar vesicles. Based on the scattering density profile of the individual domains we considered…

软凝聚态物质 · 物理学 2016-12-19 Michal Belička , Anna Weitzer , Georg Pabst

Though 1-alkanols are well known to have anesthetic properties, the mode of operation remains enigmatic. We perform extensive atomistic molecular dynamics simulation to study the partitioning of 1- alkanols of different chain-lengths in…

生物物理 · 物理学 2018-06-07 Anirban Polley
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