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This paper presents a graph bundling algorithm that agglomerates edges taking into account both spatial proximity as well as user-defined criteria in order to reveal patterns that were not perceivable with previous bundling techniques. Each…

图形学 · 计算机科学 2015-04-13 Daniel C. Moura

We study clogging of cohesive particles in a 2D hopper with experiments and simulations. The system consists of buoyant, monodisperse oil droplets in an aqueous solution, where the droplet size, buoyant force, cohesion, and hopper opening…

软凝聚态物质 · 物理学 2026-02-26 Johnathan Hoggarth , Pablo E. Illing , Eric R. Weeks , Kari Dalnoki-Veress

Cooperation between micro-organisms give rise to novel phenomena like clustering, swarming in suspension. We study the collective behavior of the artificial swimmer called Taylor line at low Reynolds number using multi-particle collision…

软凝聚态物质 · 物理学 2018-02-14 Adyant Agrawal , Sujin B. Babu

We study numerically how multiple deformable capsules squeeze into a constriction. This situation is largely encountered in microfluidic chips designed to manipulate living cells, which are soft entities. We use fully three-dimensional…

软凝聚态物质 · 物理学 2021-12-15 Clément Bielinski , Othmane Aouane , Jens Harting , Badr Kaoui

Living systems exhibit complex yet organized behavior on multiple spatiotemporal scales. To investigate the nature of multiscale coordination in living systems, one needs a meaningful and systematic way to quantify the complex dynamics, a…

适应与自组织系统 · 物理学 2020-03-11 Mengsen Zhang , William D. Kalies , J. A. Scott Kelso , Emmanuelle Tognoli

Singlet fission is commonly defined to involve a process by which an overall singlet state with local triplet structure spin-decoheres into two triplet states, thereby completing the fission process. This process, often defined in loose…

化学物理 · 物理学 2020-07-29 Max Marcus , William Barford

The coexistence of multiple types of interactions within social, technological and biological networks has moved the focus of the physics of complex systems towards a multiplex description of the interactions between their constituents.…

A particle-triaxial rigid core Hamiltonian is semi-classically treated. The coupling term corresponds to a particle rigidly coupled to the triaxial core, along a direction that does not belong to any principal plane of the inertia…

核理论 · 物理学 2022-01-26 C. M. Raduta , A. A. Raduta , R. Poenaru , Al. H. Raduta

We consider a biopolymer bundle consisting of filaments that are crosslinked together. The crosslinks are reversible: they can dynamically bind and unbind adjacent filament pairs as controlled by a binding enthalpy. The bundle is subjected…

软凝聚态物质 · 物理学 2012-01-19 Richard L. C. Vink , Claus Heussinger

Helically coiled filaments are a frequent motif in nature. In situations commonly encountered in experiments coiled helices are squeezed flat onto two dimensional surfaces. Under such 2-D confinement helices form "squeelices" - peculiar…

软凝聚态物质 · 物理学 2015-06-05 Gi-Moon Nam , Nam-Kyung Lee , Hervé Mohrbach , Albert Johner , Igor M. Kulić

We investigate the elastic energy stored in a filament pair as a function of applied twist by measuring torque under prescribed end-to-end separation conditions. We show that the torque increases rapidly to a peak with applied twist when…

软凝聚态物质 · 物理学 2024-03-12 Julien Chopin , Animesh Biswas , Arshad Kudrolli

The primary building block of the body is collagen, which is found in the extracellular matrix and in many stress-bearing tissues such as tendon and cartilage. It provides elasticity and support to cells and tissues while influencing…

生物大分子 · 定量生物学 2019-07-29 Michael W. H. Kirkness , Kathrin Lehmann , Nancy R. Forde

Entangled networks are ubiquitous in tissues, polymers, and fabrics. However, their mechanics remain insufficiently understood due to the complexity of the topological constraints at the network level. Here, we develop a mathematical…

软凝聚态物质 · 物理学 2025-09-23 Juntao Huang , Jiabin Liu , Shaoting Lin

Decentralized optimization is widely used in different fields of study such as distributed learning, signal processing, and various distributed control problems. In these types of problems, nodes of the network are connected to each other…

最优化与控制 · 数学 2025-12-10 Alexander Rogozin , Nhat Trung Nguyen , Hamed Azami Zenuzagh , Alexander Gasnikov

Surface tension governed by differential adhesion can drive fluid particle mixtures to sort into separate regions, i.e., demix. Does the same phenomenon occur in confluent biological tissues? We begin to answer this question for epithelial…

We investigate the formation of helical multifilament bundles and the torque required to achieve them as a function of applied twist. Hyperelastic filaments with circular cross sections are mounted parallel in a uniform circle onto…

软凝聚态物质 · 物理学 2026-04-01 Amit Dawadi , Animesh Biswas , Julien Chopin , Arshad Kudrolli

We study the double homology associated to triangulated spheres and present two results. First, we explicitly compute the double homology for minimum degree sphere triangulations. Using a spectral sequence argument, we compute the effect of…

代数拓扑 · 数学 2024-07-02 Carlos Gabriel Valenzuela Ruiz

Coupling is a widely used technique in the theoretical study of interacting stochastic processes. In this paper I present an example demonstrating its usefulness also in the efficient computer simulation of such processes. I first describe…

种群与进化 · 定量生物学 2012-04-16 Ilmari Karonen

We study in detail the dynamics and stability of marginally trapped surfaces during a binary black hole merger. This is the second in a two-part study. The first part studied the basic geometric aspects of the world tubes traced out by the…

广义相对论与量子宇宙学 · 物理学 2020-06-09 Daniel Pook-Kolb , Ofek Birnholtz , Jose Luis Jaramillo , Badri Krishnan , Erik Schnetter

The balance between stretching and bending deformations characterizes shape transitions of thin elastic sheets. While stretching dominates the mechanical response in tension, bending dominates in compression after an abrupt buckling…