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Jupyter has become the go-to platform for developing data applications but data and security concerns, especially when dealing with healthcare, have become paramount for many institutions and applications dealing with sensitive information.…

密码学与安全 · 计算机科学 2020-06-03 Haw-minn Lu , Adrian Kwong , Jose Unpingco

We introduce Repro, an open-source library which aims at improving the reproducibility and usability of research code. The library provides a lightweight Python API for running software released by researchers within Docker containers which…

计算与语言 · 计算机科学 2022-05-02 Daniel Deutsch , Dan Roth

Grading student assignments in STEM courses is a laborious and repetitive task for tutors, often requiring a week to assess an entire class. For students, this delay of feedback prevents iterating on incorrect solutions, hampers learning,…

人工智能 · 计算机科学 2025-02-26 Nils Wandel , David Stotko , Alexander Schier , Reinhard Klein

With ever-increasing computational capabilities, robust and automated research workflows have become essential for orchestrating large numbers of interdependent simulations. However, significant technical expertise is still required to…

As software has become an integral part of scientific workflows, reproducible research practices must take it into account. In what way? Archiving source code is a necessary but insufficient condition. The ability to redeploy software…

软件工程 · 计算机科学 2021-12-09 Ludovic Courtès

In this paper, we detail the integration of Python data analysis into a first-year physics laboratory course, a task accomplished without significant alterations to the existing course structure. We introduced tailored laboratory…

物理教育 · 物理学 2024-05-28 Eugenio Tufino , Stefano Oss , Micol Alemani

Science reproducibility is a cornerstone feature in scientific workflows. In most cases, this has been implemented as a way to exactly reproduce the computational steps taken to reach the final results. While these steps are often…

分布式、并行与集群计算 · 计算机科学 2019-05-21 Karan Vahi , Mats Rynge , George Papadimitriou , Duncan A. Brown , Rajiv Mayani , Rafael Ferreira da Silva , Ewa Deelman , Anirban Mandal , Eric Lyons , Michael Zink

Nowadays, numerous industries have exceptional demand for skills in data science, such as data analysis, data mining, and machine learning. The computational notebook (e.g., Jupyter Notebook) is a well-known data science tool adopted in…

Academic trade requires juggling multiple variants of the same content published in different formats: manuscripts, presentations, posters and computational notebooks. The need to track versions to accommodate for the…

编程语言 · 计算机科学 2021-07-15 Kacper Sokol , Peter Flach

The authors have uploaded their artifact to Zenodo, which ensures a long-term retention of the artifact. The artifact allows to re-run the experiments very smoothly, and the dependencies are well documented. The process to regenerate data…

软件工程 · 计算机科学 2021-04-21 Alessandro Pellegrini

Computational notebooks have emerged as the platform of choice for data science and analytical workflows, enabling rapid iteration and exploration. By keeping intermediate program state in memory and segmenting units of execution into…

软件工程 · 计算机科学 2021-06-22 Stephen Macke , Hongpu Gong , Doris Jung-Lin Lee , Andrew Head , Doris Xin , Aditya Parameswaran

Testing and evaluation of robotics systems is a difficult and oftentimes tedious task due to the systems' complexity and a lack of tools to conduct reproducible robotics experiments. Additionally, almost all available tools are either…

机器人学 · 计算机科学 2024-09-12 Frederik Pasch , Florian Mirus , Yongzhou Zhang , Kay-Ulrich Scholl

Computational notebooks -- such as Jupyter or Colab -- combine text and data analysis code. They have become ubiquitous in the world of data science and exploratory data analysis. Since these notebooks present a different programming…

软件工程 · 计算机科学 2022-07-20 Derek Robinson , Neil A. Ernst , Enrique Larios Vargas , Margaret-Anne D. Storey

Diverse presentation formats play a pivotal role in effectively conveying code and analytical processes during data analysis. One increasingly popular format is tutorial videos, particularly those based on Jupyter notebooks, which offer an…

人机交互 · 计算机科学 2024-08-05 Yang Ouyang , Leixian Shen , Yun Wang , Quan Li

Notebooks provide an author-friendly environment for iterative development, modular execution, and easy sharing. Distributed workflows are increasingly being authored and executed in notebooks, yet sharing and reproducing them remains…

软件工程 · 计算机科学 2026-03-31 Talha Azaz , Raza Ahmad , Md Saiful Islam , Douglas Thain , Tanu Malik

Many research directions in machine learning, particularly in deep learning, involve complex, multi-stage experiments, commonly involving state-mutating operations acting on models along multiple paths of execution. Although machine…

软件工程 · 计算机科学 2020-06-16 Michela Paganini , Jessica Zosa Forde

Open-source scientific software is a major driver of scientific progress, yet its development and reuse remain difficult in collaborative settings. Researchers repeatedly face four recurring challenges: discovering and reproducing existing…

数字图书馆 · 计算机科学 2026-04-22 Jan Philipp Albrecht , Deborah Schmidt , Lucas Rieckert , Maximilian Otto , Kyle Harrington

We report a user-friendly software environment for battery data science. It is designed to streamline data management, data cleaning, and data analysis to help bridge the gap between the domain expertise of most battery scientists and the…

系统与控制 · 电气工程与系统科学 2022-02-04 Robert Masse , Dan Ulery , Hardik Kamdar

Replication packages are crucial for enabling transparency, validation, and reuse in software engineering (SE) research. While artifact sharing is now a standard practice and even expected at premier SE venues such as ICSE, the practical…

软件工程 · 计算机科学 2026-03-24 Al Muttakin , Saikat Mondal , Chanchal K. Roy

The recomputability and reproducibility of results from scientific software requires access to both the source code and all associated input and output data. However, the full collection of these resources often does not accompany the key…

计算工程、金融与科学 · 计算机科学 2015-12-24 Christian T. Jacobs , Alexandros Avdis , Gerard J. Gorman , Matthew D. Piggott