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Profiling cellular phenotypes from microscopic imaging can provide meaningful biological information resulting from various factors affecting the cells. One motivating application is drug development: morphological cell features can be…

机器学习 · 统计学 2019-06-19 Gil Tabak , Minjie Fan , Samuel J. Yang , Stephan Hoyer , Geoff Davis

The development of data-dependent heuristics and representations for biological sequences that reflect their evolutionary distance is critical for large-scale biological research. However, popular machine learning approaches, based on…

定量方法 · 定量生物学 2021-10-13 Gabriele Corso , Rex Ying , Michal Pándy , Petar Veličković , Jure Leskovec , Pietro Liò

Euclidean distance matrices (EDMs) are a major tool for localization from distances, with applications ranging from protein structure determination to global positioning and manifold learning. They are, however, static objects which serve…

信号处理 · 电气工程与系统科学 2019-03-19 Puoya Tabaghi , Ivan Dokmanić , Martin Vetterli

Are two sets of observations drawn from the same distribution? This problem is a two-sample test. Kernel methods lead to many appealing properties. Indeed state-of-the-art approaches use the $L^2$ distance between kernel-based distribution…

机器学习 · 统计学 2019-10-02 M. Scetbon , G. Varoquaux

This paper addresses to the problem of finding the (minimum) Euclidean distance between two linear varieties. This problem is, usually, solved minimising a target function. We propose a novel approach: to use the Moore-Penrose generalised…

度量几何 · 数学 2016-11-25 M. A. Facas Vicente , Armando Gonçalves , José Vitória

The skeleton is an essential shape characteristic providing a compact representation of the studied shape. Its computation on the image grid raises many issues. Due to the effects of discretization, the required properties of the skeleton -…

计算机视觉与模式识别 · 计算机科学 2014-06-03 Aurélie Leborgne , Julien Mille , Laure Tougne

Existing deep embedding methods in vision tasks are capable of learning a compact Euclidean space from images, where Euclidean distances correspond to a similarity metric. To make learning more effective and efficient, hard sample mining is…

计算机视觉与模式识别 · 计算机科学 2016-10-28 Chen Huang , Chen Change Loy , Xiaoou Tang

The merit of projecting data onto linear subspaces is well known from, e.g., dimension reduction. One key aspect of subspace projections, the maximum preservation of variance (principal component analysis), has been thoroughly researched…

机器学习 · 计算机科学 2022-09-27 Erik Thordsen , Erich Schubert

Single-cell omics enable the profiles of cells, which contain large numbers of biological features, to be quantified. Cluster analysis, a dimensionality reduction process, is used to reduce the dimensions of the data to make it…

基因组学 · 定量生物学 2024-06-06 Okezue Bell , Arthur Lee , Elizabeth Engle

Distance metric learning aims to learn from the given training data a valid distance metric, with which the similarity between data samples can be more effectively evaluated for classification. Metric learning is often formulated as a…

机器学习 · 计算机科学 2015-02-03 Wangmeng Zuo , Faqiang Wang , David Zhang , Liang Lin , Yuchi Huang , Deyu Meng , Lei Zhang

Detecting poorly textured objects and estimating their 3D pose reliably is still a very challenging problem. We introduce a simple but powerful approach to computing descriptors for object views that efficiently capture both the object…

计算机视觉与模式识别 · 计算机科学 2017-11-15 Paul Wohlhart , Vincent Lepetit

We introduce a data-based approach to estimating key quantities which arise in the study of nonlinear control systems and random nonlinear dynamical systems. Our approach hinges on the observation that much of the existing linear theory may…

最优化与控制 · 数学 2016-04-04 Jake Bouvrie , Boumediene Hamzi

This paper presents a kernelized version of the t-SNE algorithm, capable of mapping high-dimensional data to a low-dimensional space while preserving the pairwise distances between the data points in a non-Euclidean metric. This can be…

机器学习 · 计算机科学 2023-11-22 Denis C. Ilie-Ablachim , Bogdan Dumitrescu , Cristian Rusu

Geometric Machine Learning (GML) has shown that respecting non-Euclidean geometry in data spaces can significantly improve performance over naive Euclidean assumptions. In parallel, Quantum Machine Learning (QML) has emerged as a promising…

Quantum kernel methods, i.e., kernel methods with quantum kernels, offer distinct advantages as a hybrid quantum-classical approach to quantum machine learning (QML), including applicability to Noisy Intermediate-Scale Quantum (NISQ)…

量子物理 · 物理学 2022-11-29 Daniel T. Chang

We propose a novel method of introducing structure into existing machine learning techniques by developing structure-based similarity and distance measures. To learn structural information, low-dimensional structure of the data is captured…

机器学习 · 统计学 2011-10-27 Joseph Wang , Venkatesh Saligrama , David A. Castañón

The Wasserstein distance received a lot of attention recently in the community of machine learning, especially for its principled way of comparing distributions. It has found numerous applications in several hard problems, such as domain…

机器学习 · 统计学 2017-10-23 Nicolas Courty , Rémi Flamary , Mélanie Ducoffe

Riemannian manifolds have been widely employed for video representations in visual classification tasks including video-based face recognition. The success mainly derives from learning a discriminant Riemannian metric which encodes the…

计算机视觉与模式识别 · 计算机科学 2017-01-10 Zhiwu Huang , Ruiping Wang , Shiguang Shan , Luc Van Gool , Xilin Chen

Distance-based tests, also called "energy statistics", are leading methods for two-sample and independence tests from the statistics community. Kernel-based tests, developed from "kernel mean embeddings", are leading methods for two-sample…

机器学习 · 统计学 2024-06-27 Cencheng Shen , Joshua T. Vogelstein

In this draft, fault diagnosis in nonlinear dynamic systems is addressed. The objective of this work is to establish a framework, in which not only model-based but also data-driven and machine learning based fault diagnosis strategies can…

系统与控制 · 电气工程与系统科学 2023-10-27 Steven X. Ding , Linlin Li