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Segmenting anatomical structures in medical images has been successfully addressed with deep learning methods for a range of applications. However, this success is heavily dependent on the quality of the image that is being segmented. A…

图像与视频处理 · 电气工程与系统科学 2020-07-06 Ilkay Oksuz , James R. Clough , Bram Ruijsink , Esther Puyol Anton , Aurelien Bustin , Gastao Cruz , Claudia Prieto , Andrew P. King , Julia A. Schnabel

Large prospective epidemiological studies acquire cardiovascular magnetic resonance (CMR) images for pre-symptomatic populations and follow these over time. To support this approach, fully automatic large-scale 3D analysis is essential. In…

图像与视频处理 · 电气工程与系统科学 2019-07-04 Rahman Attar , Marco Pereanez , Christopher Bowles , Stefan K. Piechnik , Stefan Neubauer , Steffen E. Petersen , Alejandro F. Frangi

Spatial transcriptomics (ST) enables the visualization of gene expression within the context of tissue morphology. This emerging discipline has the potential to serve as a foundation for developing tools to design precision medicines.…

图像与视频处理 · 电气工程与系统科学 2024-11-12 Shivam Kumar , Samrat Chatterjee

The perfect alignment of 3D echocardiographic images captured from various angles has improved image quality and broadened the field of view. This study proposes an accelerated sequential Monte Carlo (SMC) algorithm for 3D-3D rigid…

图像与视频处理 · 电气工程与系统科学 2025-04-29 Thanuja Uruththirakodeeswaran , Harald Becher , Michelle Noga , Lawrence H. Le , Pierre Boulanger , Jonathan Windram , Kumaradevan Punithakumar

Radiological imaging offers effective measurement of anatomy, which is useful in disease diagnosis and assessment. Previous study has shown that the left atrial wall remodeling can provide information to predict treatment outcome in atrial…

计算机视觉与模式识别 · 计算机科学 2018-12-07 Shuman Jia , Antoine Despinasse , Zihao Wang , Hervé Delingette , Xavier Pennec , Pierre Jaïs , Hubert Cochet , Maxime Sermesant

In cardiac magnetic resonance imaging, fully-automatic segmentation of the heart enables precise structural and functional measurements to be taken, e.g. from short-axis MR images of the left-ventricle. In this work we propose a recurrent…

机器学习 · 统计学 2016-08-16 Rudra P K Poudel , Pablo Lamata , Giovanni Montana

Automated segmentation of left ventricular cavity (LVC) in temporal cardiac image sequences (multiple time points) is a fundamental requirement for quantitative analysis of its structural and functional changes. Deep learning based methods…

图像与视频处理 · 电气工程与系统科学 2024-12-18 Yuyu Guo , Lei Bi , Zhengbin Zhu , David Dagan Feng , Ruiyan Zhang , Qian Wang , Jinman Kim

Recent advances in deep learning based image segmentation methods have enabled real-time performance with human-level accuracy. However, occasionally even the best method fails due to low image quality, artifacts or unexpected behaviour of…

The quantification of fat depots on the surroundings of the heart is an accurate procedure for evaluating health risk factors correlated with several diseases. However, this type of evaluation is not widely employed in clinical practice due…

图像与视频处理 · 电气工程与系统科学 2022-08-31 Érick Oliveira Rodrigues , Felipe Fernandes Cordeiro de Morais , Aura Conci

Automatic segmentation of myocardial contours and relevant areas like infraction and no-reflow is an important step for the quantitative evaluation of myocardial infarction. In this work, we propose a cascaded convolutional neural network…

图像与视频处理 · 电气工程与系统科学 2020-12-29 Yichi Zhang

Generating computational anatomical models of cerebrovascular networks is vital for improving clinical practice and understanding brain oxygen transport. This is achieved by extracting graph-based representations based on pre-mapping of…

定量方法 · 定量生物学 2019-12-23 Rafat Damseh , Patrick Delafontaine-Martel , Philippe Pouliot , Farida Cheriet , Frederic Lesage

Progress in High-Performance Computing in general, and High-Performance Graph Processing in particular, is highly dependent on the availability of publicly-accessible, relevant, and realistic data sets. To ensure continuation of this…

分布式、并行与集群计算 · 计算机科学 2023-09-01 Mohsen Koohi Esfahani , Paolo Boldi , Hans Vandierendonck , Peter Kilpatrick , Sebastiano Vigna

Hippocampus segmentation plays a key role in diagnosing various brain disorders such as Alzheimer's disease, epilepsy, multiple sclerosis, cancer, depression and others. Nowadays, segmentation is still mainly performed manually by…

图像与视频处理 · 电气工程与系统科学 2020-05-15 Diedre Carmo , Bruna Silva , Clarissa Yasuda , Letícia Rittner , Roberto Lotufo

We propose a novel deformation corrected compressed sensing (DC-CS) framework to recover dynamic magnetic resonance images from undersampled measurements. We introduce a generalized formulation that is capable of handling a wide class of…

计算机视觉与模式识别 · 计算机科学 2014-09-04 Sajan Goud Lingala , Edward DiBella , Mathews Jacob

Medical image segmentation of anatomical structures and pathology is crucial in modern clinical diagnosis, disease study, and treatment planning. To date, great progress has been made in deep learning-based segmentation techniques, but most…

计算机视觉与模式识别 · 计算机科学 2024-06-21 Taha Koleilat , Hojat Asgariandehkordi , Hassan Rivaz , Yiming Xiao

In clinical practice, regions of interest in medical imaging often need to be identified through a process of precise image segmentation. The quality of this image segmentation step critically affects the subsequent clinical assessment of…

图像与视频处理 · 电气工程与系统科学 2021-03-23 João B. S. Carvalho , João A. Santinha , Đorđe Miladinović , Joachim M. Buhmann

The Dice score and Jaccard index are commonly used metrics for the evaluation of segmentation tasks in medical imaging. Convolutional neural networks trained for image segmentation tasks are usually optimized for (weighted) cross-entropy.…

计算机视觉与模式识别 · 计算机科学 2020-10-09 Jeroen Bertels , Tom Eelbode , Maxim Berman , Dirk Vandermeulen , Frederik Maes , Raf Bisschops , Matthew Blaschko

LGE CMR is an efficient technology for detecting infarcted myocardium. An efficient and objective ventricle segmentation method in LGE can benefit the location of the infarcted myocardium. In this paper, we proposed an automatic framework…

图像与视频处理 · 电气工程与系统科学 2019-09-19 Yashu Liu , Wei Wang , Kuanquan Wang , Chengqin Ye , Gongning Luo

Despite coronary artery calcium scoring being considered a largely solved problem within the realm of medical artificial intelligence, this paper argues that significant improvements can still be made. By shifting the focus from pathology…

With respect to spatial overlap, CNN-based segmentation of short axis cardiovascular magnetic resonance (CMR) images has achieved a level of performance consistent with inter observer variation. However, conventional training procedures…

图像与视频处理 · 电气工程与系统科学 2020-08-24 Nick Byrne , James R. Clough , Giovanni Montana , Andrew P. King