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Experiments have shown that self-propelled particles can slide along the surface of a circular obstacle without becoming trapped over long times. Using simulations and theory, we study the impact of boundary conditions on the diffusive…

生物物理 · 物理学 2019-01-30 Theresa Jakuszeit , Ottavio A. Croze , Samuel Bell

The emergence of clustering and coarsening in crowded ensembles of self-propelled agents is studied using a lattice model in one-dimension. The persistent exclusion process, where particles move at directions that change randomly at a low…

统计力学 · 物理学 2016-08-24 Nestor Sepulveda , Rodrigo Soto

Bacteria commonly live in structured communities that affect human health and influence ecological systems. Heterogeneous populations, such as motile and non-motile populations, often coexist in bacteria communities. Motile subpopulations…

生物物理 · 物理学 2019-06-19 Haoran Xu , Justas Dauparas , Debasish Das , Eric Lauga , Yilin Wu

Colonies of rod-shaped bacteria constitute a system of colloidal active matter with nematic properties. As a single initial bacterium multiplies through repeated divisions, the resulting colony quickly loses long-range orientational order,…

We study gravitational clustering of mass points in three dimensions with random initial positions and periodic boundary conditions (no expansion) by numerical simulations. Correlation properties are well defined in the system and a sort of…

统计力学 · 物理学 2009-11-07 M. Bottaccio , A. Amici , P. Miocchi , R. Capuzzo Dolcetta , M. Montuori , L. Pietronero

The emergence of collective motion, also known as flocking or swarming, in groups of moving individuals who orient themselves using only information from their neighbors is a very general phenomenon that is manifested at multiple spatial…

统计力学 · 物理学 2016-04-26 David A. Quint , Ajay Gopinathan

Biological and robotic systems often operate in confined environments where material must be gathered without centralized control. Inspired by the effective collection strategies of aquatic worms (Lumbriculus variegatus and Tubifex…

软凝聚态物质 · 物理学 2025-05-09 R. Sinaasappel , K. R. Prathyusha , H. Tuazon , E. Mirzahossein , P. Illien , S. Bhamla , A. Deblais

The dynamical system for inertial particles in fluid flow has both attracting and repelling regions, the interplay of which can localize particles. In laminar flow experiments we find that particles, initially moving throughout the fluid…

流体动力学 · 物理学 2014-07-10 Steven Wang , Robert L. Stewart , Guy Metcalfe , Jie Wu

Motivated by the idea of using simple macroscopic examples to illustrate the physics of complex systems, we modify a historic experimental setup in which interacting floating magnets spontaneously self-assemble into ordered clusters. By…

软凝聚态物质 · 物理学 2024-12-20 P. D. S. de Lima , A. Lyons , A. Irannezhad , J. M. de Araújo , S. Hutzler , M. S. Ferreira

Fluid flow has a major effect on the aggregation and fragmentation of bacterial colonies. Yet, a generic framework to understand and predict how hydrodynamics affects colony size remains elusive. This study investigates how fluid flow…

软凝聚态物质 · 物理学 2026-04-21 Yuri Z. Sinzato , Robert Uittenbogaard , Petra M. Visser , Jef Huisman , Maziyar Jalaal

Compliant environments can mediate interactions between mechanically active cells like fibroblasts. Starting with a phenomenological model for the behaviour of single cells, we use extensive Monte Carlo simulations to predict non-trivial…

软凝聚态物质 · 物理学 2007-05-23 I. B. Bischofs , U. S. Schwarz

Aggregation of animal cells in culture comprises a series of motility, collision and adhesion processes of basic relevance for tissue engineering, bioseparations, oncology research and \textit{in vitro} drug testing. In the present paper, a…

统计力学 · 物理学 2010-10-06 S. G. Alves , M. L. Martins

Direct numerical simulation is used to investigate effects of turbulent flow in the confined geometry of a face-centered cubic porous unit cell on the transport, clustering, and deposition of fine particles at different Stokes numbers ($St…

流体动力学 · 物理学 2022-12-09 Sourabh V. Apte , Thibault Oujia , Keigo Matsuda , Benjamin Kadoch , Xiaoliang He , Kai Schneider

Cellular nutrient consumption is influenced by both the nutrient uptake kinetics of an individual cell and the cells' spatial arrangement. Large cell clusters or colonies have inhibited growth at the cluster's center due to the shielding of…

生物物理 · 物理学 2013-06-14 Maxim O. Lavrentovich , John H. Koschwanez , David R. Nelson

When the motion of a motile cell is observed closely, it appears erratic, and yet the combination of nonequilibrium forces and surfaces can produce striking examples of organization in microbial systems. While most of our current…

The dispersal of cells from an initially constrained location is a crucial aspect of many physiological phenomena ranging from morphogenesis to tumour spreading. In such processes, the way cell-cell interactions impact the motion of single…

Clustering is one of the mayor collective phenomena observed in active matter. We study the overdamped motion of interacting active Brownian particles in two dimensions. An instability in the pair correlation function causes the onset of…

软凝聚态物质 · 物理学 2024-03-18 Rüdiger Kürsten

The motility-induced phase separation exhibited by active particles with repulsive interactions is well known. We show that the interaction softness of active particles destabilizes the highly ordered dense phase, leading to the formation…

软凝聚态物质 · 物理学 2022-09-21 Monika Sanoria , Raghunath Chelakkot , Amitabha Nandi

Colloidal particles, amphiphiles, and functionalized nanoparticles are examples of systems that frequently exhibit short-range attractions coupled with long-range repulsions. In this work, we observe striking differences in the dynamics of…

软凝聚态物质 · 物理学 2017-06-01 Jakub Pȩkalski , Andrew P. Santos , Athanassios Z. Panagiotopoulos

We study active surface wetting using a minimal model of bacteria that takes into account the intrinsic motility diversity of living matter. A mixture of "fast" and "slow" self-propelled Brownian particles is considered in the presence of a…

软凝聚态物质 · 物理学 2023-02-08 Mauricio Rojas-Vega , Pablo de Castro , Rodrigo Soto