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Adaptive systems -- such as a biological organism gaining survival advantage, an autonomous robot executing a functional task, or a motor protein transporting intracellular nutrients -- must model the regularities and stochasticity in their…

统计力学 · 物理学 2021-04-13 A. B. Boyd , J. P. Crutchfield , M. Gu

In this thesis we aim to analyze and quantify the energetic and information contents that can be extracted from a dynamical system subject to the external environment. The latter is usually assumed to be deleterious for the feasibility of…

量子物理 · 物理学 2018-05-07 Stefano Gherardini

An adaptive design adjusts dynamically as information is accrued and a consequence of applying an adaptive design is the potential for inducing small-sample bias in estimates. In psychometrics and psychophysics, a common class of studies…

统计方法学 · 统计学 2025-02-17 Simon Bang Kristensen , Katrine Bødkergaard , Bo Martin Bibby

To better characterize the statistical processes underlying human decision-making, we performed experiments where human participants visualized fluctuations of physical nonequilibrium stationary states, and we analyzed responses in the…

We investigate the limits of thermometry using quantum probes at thermal equilibrium within the Bayesian approach. We consider the possibility of engineering interactions between the probes in order to enhance their sensitivity, as well as…

Generalizing response theory of open systems far from equilibrium is a central quest of nonequilibrium statistical physics. Using stochastic thermodynamics, we develop an algebraic method to study the response of nonequilibrium steady state…

统计力学 · 物理学 2023-08-09 Timur Aslyamov , Massimiliano Esposito

Continuous adaptation to variable environments is crucial for the survival of living organisms. Here, we analyze how adaptation, forecasting, and resource mobilization towards a target state, termed actionability, interact to determine…

细胞行为 · 定量生物学 2024-04-15 Jose M. G. Vilar , Leonor Saiz

Adaptation of the chemotaxis sensory pathway of the bacterium Escherichia coli is integral for detecting chemicals over a wide range of background concentrations, ultimately allowing cells to swim towards sources of attractant and away from…

细胞行为 · 定量生物学 2015-05-18 Diana Clausznitzer , Olga Oleksiuk , Linda Lovdok , Victor Sourjik , Robert G. Endres

In order to interact intelligently with objects in the world, animals must first transform neural population responses into estimates of the dynamic, unknown stimuli which caused them. The Bayesian solution to this problem is known as a…

机器学习 · 计算机科学 2025-07-30 Sacha Sokoloski

The process of calibrating computer models of natural phenomena is essential for applications in the physical sciences, where plenty of domain knowledge can be embedded into simulations and then calibrated against real observations. Current…

机器学习 · 计算机科学 2025-01-20 Rafael Oliveira , Dino Sejdinovic , David Howard , Edwin V. Bonilla

In the need for low assumption inferential methods in infinite-dimensional settings, Bayesian adaptive estimation via a prior distribution that does not depend on the regularity of the function to be estimated nor on the sample size is…

统计方法学 · 统计学 2014-09-23 Catia Scricciolo

We present an application of the theory of stochastic processes to model and categorize non-equilibrium physical phenomena. The concepts of uniformly continuous probability measures and modular evolution lead to a systematic hierarchical…

数学物理 · 物理学 2009-08-18 Enrique Hernandez-Lemus , Jesus K. Estrada-Gil

Across diverse biological systems -- ranging from neural networks to intracellular signaling and genetic regulatory networks -- the information about changes in the environment is frequently encoded in the full temporal dynamics of the…

定量方法 · 定量生物学 2020-07-01 Sarah A Cepeda-Humerez , Jakob Ruess , Gašper Tkačik

For sensory networks, we determine the rate with which they acquire information about the changing external conditions. Comparing this rate with the thermodynamic entropy production that quantifies the cost of maintaining the network, we…

统计力学 · 物理学 2013-04-08 A. C. Barato , D Hartich , U. Seifert

Linear Response theory aims to predict how added forcing alters the statistical properties of an unforced system. These kinds of questions have been studied predominantly for autonomous dynamical systems, yet many systems in the physical,…

动力系统 · 数学 2026-04-07 Stefano Galatolo , Valerio Lucarini

Living systems adapt to various environmental conditions by changing their internal states. Inspired by gene expression and epigenetic modification dynamics, we herein propose a generic mechanism for adaptation by combining fast oscillatory…

定量方法 · 定量生物学 2022-09-23 Yuuki Matsushita , Kunihiko Kaneko

Organisms adapt to volatile environments by integrating sensory information with internal memory, yet their information processing is constrained by resource limitations. Such limitations can fundamentally alter optimal estimation…

生物物理 · 物理学 2025-11-14 Takehiro Tottori , Tetsuya J. Kobayashi

The optimal selection of experimental conditions is essential to maximizing the value of data for inference and prediction, particularly in situations where experiments are time-consuming and expensive to conduct. We propose a general…

机器学习 · 统计学 2012-12-04 Xun Huan , Youssef M. Marzouk

Non-equilibrium states of a thermodynamic statistical system are investigated using the thermodynamic parameter of the system lifetime, first-passage time, the time before degeneration of the system under influence of fluctuations.…

统计力学 · 物理学 2020-03-19 V. V. Ryazanov

A massively recurrent neural network responds on one side to input stimuli and is autonomously active, on the other side, in the absence of sensory inputs. Stimuli and information processing depends crucially on the qualia of the…

无序系统与神经网络 · 物理学 2012-02-01 Dimitrije Markovic , Claudius Gros