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In cell proliferation, stem cell differentiation, chemoresistance and tissue organization, the ubiquitous role of YAP/TAZ continues to impact our fundamental understanding in numerous physiological and disease systems. YAP/TAZ is an…

生物物理 · 物理学 2016-06-28 Meng Sun , Fabian Spill , Muhammad H. Zaman

Collective cell migration is a hallmark of developmental and patho-physiological states, including wound healing and invasive cancer growth. The integrity of the expanding epithelial sheets can be influenced by extracellular cues, including…

We derive and simulate a mathematical model for mechanotransduction related to the Rho GTPase signalling pathway. The model addresses the bidirectional coupling between signalling processes and cell mechanics. A numerical method based on…

数值分析 · 数学 2025-06-11 Sofie Verhees , Chandrasekhar Venkataraman , Mariya Ptashnyk

In-vivo, cells are frequently exposed to multiple mechanical stimuli arising from the extracellular microenvironment, with deep impact on many biological functions. On the other hand, current methods for mechanobiology do not allow to…

细胞行为 · 定量生物学 2017-12-07 M. Monticelli , D. S. Jokhun , D. Petti , G. V. Shivashankar , R. Bertacco

We perform one and two-parameter numerical bifurcation analysis of a mechanotransduction model approximating the dynamics of mesenchymal stem cell differentiation into neurons, adipocytes, myocytes and osteoblasts. For our analysis, we use…

细胞行为 · 定量生物学 2023-03-16 Katiana Kontolati , Constantinos Siettos

Spatiotemporal patterns are common in biological systems. For electrically-coupled cells previous studies of pattern formation have mainly used external forcing as the main bifurcation parameter. The purpose of this paper is to show that…

动力系统 · 数学 2021-11-02 H. O. Fatoyinbo , R. G. Brown , D. J. W. Simpson , B. van Brunt

Electrical signals in excitable cells involve spatially localized ionic fluxes through ion channels and pumps on cellular lipid membranes. Common approaches to understand how these localized fluxes spread assume that the membrane and the…

软凝聚态物质 · 物理学 2024-07-17 Hyeongjoo Row , Joshua B. Fernandes , Kranthi K. Mandadapu , Karthik Shekhar

Graph convolutional networks and their variants have shown significant promise in 3D human pose estimation. Despite their success, most of these methods only consider spatial correlations between body joints and do not take into account…

计算机视觉与模式识别 · 计算机科学 2023-08-30 Tanvir Hassan , A. Ben Hamza

The shape that stem cells reach at the end of adhesion process influences their differentiation. Rearrangement of cytoskeleton and modification of intracellular tension may activate mechanotransduction pathways controlling cell commitment.…

We suggest a mechanism based on spike time dependent plasticity (STDP) of synapses to store, retrieve and predict temporal sequences. The mechanism is demonstrated in a model system of simplified integrate-and-fire type neurons densely…

适应与自组织系统 · 物理学 2009-11-07 Thomas Nowotny , Misha I. Rabinovich , Henry D. I. Abarbanel

Nucleocytoplasmic transport is essential for cellular function, presenting a canonical example of rapid molecular sorting inside cells. It consists of a coordinated interplay between import/export of molecules in/out the cell nucleus. Here,…

生物物理 · 物理学 2026-04-24 S. Alex Rautu , Alexandra Zidovska , Michael J. Shelley

Background: Mechanotransduction in bone cells plays a pivotal role in osteoblast differentiation and bone remodelling. Mechanotransduction provides the link between modulation of the extracellular matrix and intracellular actions. By…

亚细胞过程 · 定量生物学 2019-02-26 Gianluca Ascolani , Timothy M. Skerry , Damien Lacroix , Enrico Dall'Ara , Aban Shuaib

The concept of a cell$'$s receptive field is a bedrock in systems neuroscience, and the classical static description of the receptive field has had enormous success in explaining the fundamental mechanisms underlying visual processing.…

神经元与认知 · 定量生物学 2025-04-10 Ifedayo-EmmanuEL Adeyefa-Olasupo

We propose a new model based on the Ising model with the aim to study synaptic plasticity phenomena in neural networks. It is today well established in biology that the synapses or connections between certain types of neurons are…

无序系统与神经网络 · 物理学 2016-07-22 Eugene Pechersky , Guillem Via , Anatoly Yambartsev

Many biological systems can sense periodical variations in a stimulus input and produce well-timed, anticipatory responses after the input is removed. Such systems show memory effects for retaining timing information in the stimulus and…

神经元与认知 · 定量生物学 2015-09-09 Ying-Jen Yang , Chun-Chung Chen , Pik-Yin Lai , C. K. Chan

With the increase in interest in deployment of robots in unstructured environments to work alongside humans, the development of human-like sense of touch for robots becomes important. In this work, we implement a multi-channel neuromorphic…

机器人学 · 计算机科学 2021-09-06 Anupam K. Gupta , Andrei Nakagawa , Nathan F. Lepora , Nitish V. Thakor

In Part I of this article we have developed a novel mechanobiological model of a Tissue Engineering process that accounts for the mechanisms through which an isotropic or anisotropic adherence condition regulates the active functions of the…

数值分析 · 数学 2015-12-14 Chiara Lelli , Riccardo Sacco , Paola Causin , Manuela T. Raimondi

Both action potentials and mechanosensitive signalling are an important communication mechanisms in plants. Considering an information theoretic framework, this paper explores the effective range of multiple action potentials for a long…

分子网络 · 定量生物学 2019-11-13 Hamdan Awan , Kareem Zeid , Raviraj S. Adve , Nigel Wallbridge , Carrol Plummer , Andrew W. Eckford

Notch signaling is an evolutionary conserved cell-cell communication pathway. Besides regulating cell-fate decisions at an individual cell level, Notch signaling coordinates the emergent spatiotemporal patterning in a tissue through…

分子网络 · 定量生物学 2020-05-13 Federico Bocci , Jose Nelson Onuchic , Mohit Kumar Jolly

Cardiac myocytes are the fundamental cells composing the heart muscle. The propagation of electric signals and chemical quantities through them is responsible for their nonlinear contraction and dilatation. In this study, a theoretical…

软凝聚态物质 · 物理学 2018-08-01 Pietro Lenarda , Alessio Gizzi , Marco Paggi
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