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Prediction and discovery of new materials with desired properties are at the forefront of quantum science and technology research. A major bottleneck in this field is the computational resources and time complexity related to finding new…

Machine learning for point clouds has been attracting much attention, with many applications in various fields, such as shape recognition and material science. For enhancing the accuracy of such machine learning methods, it is often…

机器学习 · 计算机科学 2023-12-29 Naoki Nishikawa , Yuichi Ike , Kenji Yamanishi

Latent variable models for network data extract a summary of the relational structure underlying an observed network. The simplest possible models subdivide nodes of the network into clusters; the probability of a link between any two nodes…

机器学习 · 计算机科学 2012-07-03 Konstantina Palla , David Knowles , Zoubin Ghahramani

We redevelop persistent homology (topological persistence) from a categorical point of view. The main objects of study are diagrams, indexed by the poset of real numbers, in some target category. The set of such diagrams has an interleaving…

代数拓扑 · 数学 2014-05-13 Peter Bubenik , Jonathan A. Scott

One of the paramount challenges in neuroscience is to understand the dynamics of individual neurons and how they give rise to network dynamics when interconnected. Historically, researchers have resorted to graph theory, statistics, and…

神经元与认知 · 定量生物学 2019-02-08 Jean-Baptiste Bardin , Gard Spreemann , Kathryn Hess

This paper proposes a novel topological learning framework that integrates networks of different sizes and topology through persistent homology. Such challenging task is made possible through the introduction of a computationally efficient…

神经元与认知 · 定量生物学 2023-01-30 Tananun Songdechakraiwut , Moo K. Chung

Persistent homology is a natural tool for probing the topological characteristics of weighted graphs, essentially focusing on their $0$-dimensional homology. While this area has been substantially studied, we present a new approach to…

代数拓扑 · 数学 2023-10-03 Omer Bobrowski , Primoz Skraba

Persistent homology is a popular technique in topological data analysis that tracks the lifespans of homological features in a nested sequence of spaces. This data is typically presented in a multi-set called a persistence diagram or a…

代数拓扑 · 数学 2025-11-26 Deni Salja

Score-based approaches in the structure learning task are thriving because of their scalability. Continuous relaxation has been the key reason for this advancement. Despite achieving promising outcomes, most of these methods are still…

机器学习 · 计算机科学 2023-09-07 Quang-Duy Tran , Phuoc Nguyen , Bao Duong , Thin Nguyen

Understanding how neural networks generalize on unseen data is crucial for designing more robust and reliable models. In this paper, we study the generalization gap of neural networks using methods from topological data analysis. For this…

Machine learning provides algorithms that can learn from data and make inferences or predictions on data. Bayesian networks are a class of graphical models that allow to represent a collection of random variables and their condititional…

人工智能 · 计算机科学 2019-01-08 Robert Leppert , Karl-Heinz Zimmermann

In many domains, we are interested in analyzing the structure of the underlying distribution, e.g., whether one variable is a direct parent of the other. Bayesian model-selection attempts to find the MAP model and use its structure to…

机器学习 · 计算机科学 2013-01-18 Nir Friedman , Daphne Koller

Granular materials exhibit intricate force networks, often concentrated in chains rather than being uniformly distributed. These meso-scale structures are complex to characterize, owing to their heterogeneous and anisotropic nature. We…

软凝聚态物质 · 物理学 2025-08-06 S Vishali , Abrar Naseer , Vijay Natarajan , Tejas G Murthy

Many complex systems in the real world can be characterized by attributed networks. To mine the potential information in these networks, deep embedded clustering, which obtains node representations and clusters simultaneously, has been paid…

机器学习 · 计算机科学 2022-05-31 Yimei Zheng , Caiyan Jia , Jian Yu , Xuanya Li

We use topological data analysis to study "functional networks" that we construct from time-series data from both experimental and synthetic sources. We use persistent homology with a weight rank clique filtration to gain insights into…

定量方法 · 定量生物学 2017-05-24 Bernadette J. Stolz , Heather A. Harrington , Mason A. Porter

We present a unified pipeline for univariate time series classification via complex networks and persistent homology. A time series is mapped to a graph through one of five constructions across three families (visibility (natural and…

代数拓扑 · 数学 2026-05-05 İsmail Güzel

Our interest is in multiplex network data with multiple network samples observed across the same set of nodes. Examples originate from a variety of fields, including brain connectivity, international trade networks, and social networks,…

统计方法学 · 统计学 2026-04-21 Yuren Zhou , Yuqi Gu , David B. Dunson

Recent genomic and bioinformatic advances have motivated the development of numerous random network models purporting to describe graphs of biological, technological, and sociological origin. The success of a model has been evaluated by how…

In this work, we introduce a novel approach based on algebraic topology to enhance graph convolution and attention modules by incorporating local topological properties of the data. To do so, we consider the framework of sheaf neural…

机器学习 · 计算机科学 2023-11-20 Gabriele Cesa , Arash Behboodi

Link prediction is an important learning task for graph-structured data. In this paper, we propose a novel topological approach to characterize interactions between two nodes. Our topological feature, based on the extended persistent…

机器学习 · 计算机科学 2021-06-15 Zuoyu Yan , Tengfei Ma , Liangcai Gao , Zhi Tang , Chao Chen