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In the subtropical gyres, phytoplankton rely on eddies for transporting nutrients from depth to the euphotic zone. But, what controls the rate of nutrient supply for new production? We show that vertical nutrient flux depends both on the…

种群与进化 · 定量生物学 2022-03-02 Mara Freilich , Glenn Flierl , Amala Mahadevan

Ecological systems show a variety of characteristic patterns of biodiversity in space and time. It is a challenge for theory to find models that can reproduce and explain the observed patterns. Since the advent of island biogeography these…

种群与进化 · 定量生物学 2019-10-21 Michaela Hamm , Barbara Drossel

We analyze plankton-nutrient food chain models composed of phytoplankton, herbivorous zooplankton and a limiting nutrient. These models have played a key role in understanding the dynamics of plankton in the oceanic layer. Given the strong…

概率论 · 数学 2024-07-10 Alexandru Hening , Nguyen Trong Hieu , Dang Hai Nguyen , Nhu Ngoc Nguyen

Living systems operate far from thermal equilibrium by converting the chemical potential of ATP into mechanical work to achieve growth, replication or locomotion. Given time series observations of intra-, inter- or multicellular processes,…

生物物理 · 物理学 2021-11-03 Dominic J. Skinner , Jörn Dunkel

Using the stochastic thermodynamics, we determine the entropy production and the dynamic heat capacity of systems subject to a sinusoidally time dependent temperature, in which case the systems are permanently out of thermodynamic…

统计力学 · 物理学 2019-06-26 Carlos E. Fiore , Mário J. de Oliveira

Food web topology and energy flow rates across food web linkages can influence ecosystem properties such as stability. Stability predictions from current models of energy flow are often sensitive to details in their formulation, and their…

种群与进化 · 定量生物学 2024-01-11 Zhening Li , John Harte

An agent-based model of population dynamics is presented. The model has as its expected behaviour the population dynamics of the equation-based Webworld model, within which large communities of species can be grown on evolutionary time…

种群与进化 · 定量生物学 2008-11-18 Craig R. Powell

Living systems maintain or increase local order by working against the Second Law of Thermodynamics. Thermodynamic consistency is restored as they dissipate heat, thereby increasing the net entropy of their environment. Recently introduced…

生物物理 · 物理学 2021-05-03 Dominic J. Skinner , Jörn Dunkel

A numerical model for mixotrophic phytoplankton is described in this paper. In contrast with traditional approach where nutrient uptake rates are constrained by a predefined growth rate, this model uses empirical traits to compute nutrient…

生物物理 · 物理学 2021-06-16 My Ha Dao

Statistical averaging and asynchronous population dynamics as portfolio mechanisms are considered as the most important processes with which biodiversity contributes to ecosystem stability. However, portfolio theories usually regard…

种群与进化 · 定量生物学 2022-02-17 Chun-Wei Chang , Chih-hao Hsieh , Takeshi Miki

Marine chlorophyll which is present within phytoplankton are the basis of photosynthesis and they have a high significance in sustaining ecological balance as they highly contribute toward global primary productivity and comes under the…

定量方法 · 定量生物学 2023-04-26 Subhrangshu Adhikary , Sudhir Kumar Chaturvedi , Saikat Banerjee , Sourav Basu

The tendency of irreversible processes to generate entropy is the ultimate driving force for the evolution of nature. In engineering, entropy production is often used as a measure of usable energy losses. In this study we show that the…

地球物理 · 物理学 2018-10-30 Yi Yang , Stefan Bruns , Susan Stipp , Henning Sørensen

Links in most real networks often change over time. Such temporality of links encodes the ordering and causality of interactions between nodes and has a profound effect on network dynamics and function. Empirical evidences have shown that…

社会与信息网络 · 计算机科学 2020-07-10 Disheng Tang , Wenbo Du , Louis Shekhtman , Yijie Wang , Shlomo Havlin , Xianbin Cao , Gang Yan

Fluctuations in parameters that are typically treated as fixed play a crucial role in the behavior of complex systems. However, to date, we lack a general non-equilibrium thermodynamic treatment of such a complex system. In this Letter, to…

统计力学 · 物理学 2026-03-31 Tuan Pham , Deepak Gupta

The goal of this work is the development of a motion model for sequentially timed movement actions in robotic systems under specific consideration of temporal stabilization, that is maintaining an approximately constant overall movement…

机器人学 · 计算机科学 2021-07-30 Sebastian Doliwa , Muhammad Ayaz Hussain , Tim Sziburis , Ioannis Iossifidis

The analysis of temporal networks heavily depends on the analysis of time-respecting paths. However, before being able to model and analyze the time-respecting paths, we have to infer the timescales at which the temporal edges influence…

物理与社会 · 物理学 2023-01-30 Luka V. Petrović , Anatol Wegner , Ingo Scholtes

Self-organization creates new order and shifts sub-boundaries while reorganizing energy and entropy within a control volume. This article examines pathway selection and tests whether maximizing the entropy generation rate can forecast…

材料科学 · 物理学 2026-03-10 J. A. Sekhar

The competition for resources is a defining feature of microbial communities. In many contexts, from soils to host-associated communities, highly diverse microbes are organized into metabolic groups or guilds with similar resource…

物理与社会 · 物理学 2025-05-05 Xiaowen Chen , Kyle Crocker , Seppe Kuehn , Aleksandra M. Walczak , Thierry Mora

Systems coupled to multiple thermodynamic reservoirs can exhibit nonequilibrium dynamics, breaking detailed balance to generate currents. To power these currents, the entropy of the reservoirs increases. The rate of entropy production, or…

统计力学 · 物理学 2019-04-16 Junang Li , Jordan M. Horowitz , Todd R. Gingrich , Nikta Fakhri

The theory of entropy production in nonequilibrium, Hamiltonian systems, previously described for steady states using partitions of phase space, is here extended to time dependent systems relaxing to equilibrium. We illustrate the main…

混沌动力学 · 物理学 2009-10-31 T. Gilbert , J. R. Dorfman , P. Gaspard
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