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Accurate estimates of the reproduction ratio are crucial to project infectious disease epidemic evolution and guide public health response. Here, we prove that estimates of the reproduction ratio based on inference from surveillance data…

物理与社会 · 物理学 2025-01-08 Piero Birello , Michele Re Fiorentin , Boxuan Wang , Vittoria Colizza , Eugenio Valdano

A pandemic caused by a new coronavirus has spread worldwide, affecting Argentina. We implement an SEIR model to analyze the disease evolution in Buenos Aires and neighbouring cities. The model parameters are calibrated using the number of…

The COVID-19 pandemic has challenged authorities at different levels of government administration around the globe. When faced with diseases of this severity, it is useful for the authorities to have prediction tools to estimate in advance…

We present results of different approaches to model the evolution of the COVID-19 epidemic in Argentina, with a special focus on the megacity conformed by the city of Buenos Aires and its metropolitan area, including a total of 41 districts…

物理与社会 · 物理学 2020-07-15 E. Tagliazucchi , P. Balenzuela , M. Travizano , G. B. Mindlin , P. D. Mininni

In this article, we investigate the importance of demographic and contact patterns in determining the spread of COVID-19 and to the effectiveness of social distancing policies. We investigate these questions proposing an augmented…

种群与进化 · 定量生物学 2022-05-12 M. A. Ridenti , L. K. Teles , A. Maranhão , V. K. Teles

This study examines the effectiveness of regional lockdown strategies in mitigating pathogen spread across regional units, termed cities hereinafter. We develop simplified models to analyze infection spread across cities within a country…

物理与社会 · 物理学 2025-07-30 Viktor Bezborodov , Tyll Krueger , Cornelia Pokalyuk , Piotr Szymański , Aurélien Velleret

The effective reproduction number, R(t), is a central point in the study of infectious diseases. It establishes in an explicit way the extent of an epidemic spread process in a population. The current estimation methods for the time…

种群与进化 · 定量生物学 2021-02-26 D. C. P. Jorge , J. F. Oliveira , J. G. V. Miranda , R. F. S. Andrade , S. T. R. Pinho

We present a compartmental mathematical model with demography for the spread of the COVID-19 disease, considering also asymptomatic infectious individuals. We compute the basic reproductive ratio of the model and study the local and global…

种群与进化 · 定量生物学 2020-11-17 Vasiliki Bitsouni , Nikolaos Gialelis , Ioannis G. Stratis

Reproduction numbers are widely used for the estimation and prediction of epidemic spreading processes over networks. However, reproduction numbers do not enable estimation and prediction in individual communities within networks, and they…

系统与控制 · 电气工程与系统科学 2025-06-23 Baike She , Philip E. Paré , Matthew Hale

National stay-at-home orders, or lockdowns, were imposed in several countries to drastically reduce the social interactions mainly responsible for the transmission of the SARS-CoV-2 virus. Despite being essential to slow down the COVID-19…

物理与社会 · 物理学 2020-11-03 Adrià Plazas , Irene Malvestio , Michele Starnini , Albert Díaz-Guilera

We use daily data from Lombardy, the Italian region most affected by the COVID-19 outbreak, to calibrate a SIR model individually on each municipality. These are all covered by the same health system and, in the post-lockdown phase we focus…

种群与进化 · 定量生物学 2020-04-20 Pietro Battiston , Simona Gamba

We propose a compartmental mathematical model for the spread of the COVID-19 disease, showing its usefulness with respect to the pandemic in Portugal, from the first recorded case in the country till the end of the three states of…

种群与进化 · 定量生物学 2020-11-30 Ana P. Lemos-Paiao , Cristiana J. Silva , Delfim F. M. Torres

The basic and effective reproduction numbers are widely used metrics for characterizing the dynamics of infectious disease epidemics. However, the interpretation of these numbers is based on the assumption of homogeneous mixing and may not…

种群与进化 · 定量生物学 2026-03-24 Zahra Ghadiri , Jari Saramäki , Takayuki Hiraoka

Nowcasting and forecasting of epidemic spreading rely on incidence series of reported cases to derive the fundamental epidemiological parameters for a given pathogen. Two relevant drawbacks for predictions are the unknown fractions of…

种群与进化 · 定量生物学 2022-08-31 Guilherme S. Costa , Wesley Cota , Silvio C. Ferreira

In the absence of neither an effective treatment or vaccine and with an incomplete understanding of the epidemiological cycle, Govt. has implemented a nationwide lockdown to reduce COVID-19 transmission in India. To study the effect of…

种群与进化 · 定量生物学 2020-08-26 Tridip Sardar , Sk Shahid Nadim , Sourav Rana , Joydev Chattopadhyay

Voluntary shelter-in-place directives and lockdowns are the main non-pharmaceutical interventions that governments around the globe have used to contain the Covid-19 pandemic. In this paper we study the impact of such interventions in the…

This is a pedagogical paper on estimating the number of people that can be infected by one infectious person during an epidemic outbreak, known as the reproduction number. Knowing the number is crucial for developing policy responses. There…

种群与进化 · 定量生物学 2020-06-30 H. Susanto , V. R. Tjahjono , A. Hasan , M. F. Kasim , N. Nuraini , E. R. M. Putri , R. Kusdiantara , H. Kurniawan

We discuss the generation of various reproduction ratios or numbers that are very useful to monitor an ongoing epidemic like Covid-19 and examine the effects of intervention measures. A detailed SEIR algorithm is described for their…

种群与进化 · 定量生物学 2020-06-25 Paulo R. Zingano , Janaina P. Zingano , Alessandra M. Silva , Carolina P. Zingano

Susceptible-Invective-Recovered (SIR) mathematical models are in high demand due to the COVID-19 pandemic. They are used in their standard formulation, or through the many variants, trying to fit and hopefully predict the number of new…

种群与进化 · 定量生物学 2020-05-19 Ben-Hur Francisco Cardoso , Sebastián Gonçalves

During the COVID-19 pandemic, the slope of the epidemic curve in Mexico City has been quite unstable. We have predicted that in the case that a fraction of the population above a certain threshold returns to the public space, the negative…

物理与社会 · 物理学 2020-08-31 Guillermo de Anda-Jáuregui , Enrique Hernández-Lemus
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