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Background and Objective: This proof of concept study investigates mathematical modelling of blood flow and oxygen transport in cerebral microcirculation, focusing on understanding hemodynamic responses. By coupling oxygen transport models…

数值分析 · 数学 2024-11-19 Maryam Samavaki , Santtu Söderholm , Arash Zarrin Nia , Sampsa Pursiainen

Age-related arterial remodeling is dominated by progressive loss of elastic-fiber function and concomitant stiffening, and in many vascular beds it is also accompanied by measurable geometric remodeling (e.g., elongation and tortuosity).…

流体动力学 · 物理学 2026-04-08 Khalid M. Saqr

The definition of metastable states is an ubiquitous task in the design and analysis of molecular simulations, and is a crucial input in a variety of acceleration methods for the sampling of long configurational trajectories. Although…

计算物理 · 物理学 2026-04-16 Noé Blassel , Tony Lelièvre , Gabriel Stoltz

Tissue homeostasis, the biological process of maintaining a steady state in tissue via control of cell proliferation, death, and metabolic function, is essential for the development, growth, maintenance, and proper function of living…

生物物理 · 物理学 2025-01-15 KVS Chaithanya , Jan Rozman , Andrej Košmrlj , Rastko Sknepnek

Patient-specific modeling of cardiovascular flows with high-fidelity is challenging due to its dependence on accurately estimated velocity boundary profiles, which are essential for precise simulations and directly influence wall shear…

Cerebral aneurysms are pathological dilations of intracranial arteries that can rupture with devastating consequences, including subarachnoid hemorrhage, stroke, and death. Accumulating evidence indicates that local hemodynamic forces play…

其他定量生物学 · 定量生物学 2025-05-22 Reza Bozorgpour , Pilwan Kim

Generating computational anatomical models of cerebrovascular networks is vital for improving clinical practice and understanding brain oxygen transport. This is achieved by extracting graph-based representations based on pre-mapping of…

定量方法 · 定量生物学 2019-12-23 Rafat Damseh , Patrick Delafontaine-Martel , Philippe Pouliot , Farida Cheriet , Frederic Lesage

Computational simulations have the potential to assist in liver resection surgeries by facilitating surgical planning, optimizing resection strategies, and predicting postoperative outcomes. The modeling of liver tissue across multiple…

计算工程、金融与科学 · 计算机科学 2023-06-14 Adnan Ebrahem , Etienne Jessen , Marco F. P. ten Eikelder , Tarun Gangwar , Michał Mika , Dominik Schillinger

In this paper, we present an analytic solution for pulse wave propagation in a flexible arterial model with tapering, physiological boundary conditions and variable wall properties (wall elasticity and thickness). The change of wall…

流体动力学 · 物理学 2023-12-20 Peishuo Wu , Chi Zhu

This study performs parameter inference in a partial differential equations system of pulmonary circulation. We use a fluid dynamics network model that takes selected parameter values and mimics the behaviour of the pulmonary haemodynamics…

A simple kinematic growth model for muscular arteries is presented which allows the incorporation of residual stresses such that a homeostatic in-vivo stress state under physiological loading is obtained. To this end, new evolution…

定量方法 · 定量生物学 2025-02-28 Klemens Uhlmann , Daniel Balzani

Recently developed methods for rapid continuous volumetric two-photon microscopy facilitate the observation of neuronal activity in hundreds of individual neurons and changes in blood flow in adjacent blood vessels across a large volume of…

图像与视频处理 · 电气工程与系统科学 2020-01-16 Shir Gur , Lior Wolf , Lior Golgher , Pablo Blinder

Vascular circulation follows fundamental biophysical principles that optimize mass transport and metabolic energy expenditure, which can be effectively modeled by Murray's law. However, contemporary deep learning methods for vascular…

计算机视觉与模式识别 · 计算机科学 2026-05-26 Yi Zhou , Thiara Sana Ahmed , Jacqueline Chua , Meng Wang , Qinrong Zhang , Alejandro F. Frangi , Huazhu Fu , Jun Cheng , Leopold Schmetterer , Bingyao Tan

Using analytical expressions for the pressure and velocity waveforms in tapered vessels, we construct a linear 1D model for wave propagation in stenotic vessels in the frequency domain. We demonstrate that using only two parameters to…

流体动力学 · 物理学 2019-07-24 George Papadakis , Jean Raspaud

The link between atherosclerosis and blood flow-induced haemodynamic luminal shear stresses is well established. However, this understanding has not been translated into clinical practice because of the interdependent effects of the complex…

医学物理 · 物理学 2023-12-04 Mingzi Zhang , Ramtin Gharleghi , Chi Shen , Susann Beier

Continuously measured arterial blood velocity can provide insight into physiological parameters and potential disease states. The efficient and effective description of the temporal profiles of arterial velocity is crucial for both clinical…

定量方法 · 定量生物学 2024-02-16 Justen R Geddes , Amanda Randles

Here we develop a lung ventilation model, based a continuum poroelastic representation of lung parenchyma and a 0D airway tree flow model. For the poroelastic approximation we design and implement a lowest order stabilised finite element…

计算物理 · 物理学 2015-04-21 Lorenz Berger , David Kay , Kelly Burrowes , Vicente Grau , Simon Tavener , Rafel Bordas

This paper presents a novel framework for the modeling of biological networks. It makes use of recent tools analyzing the robust satisfaction of properties of (hybrid) dynamical systems. The main challenge of this approach as applied to…

计算工程、金融与科学 · 计算机科学 2012-08-22 Nicolas Mobilia , Alexandre Donzé , Jean Marc Moulis , Éric Fanchon

Self-regulation of living tissue as an example of self-organization phenomena in active fractal systems of biological, ecological, and social nature is under consideration. The characteristic feature of these systems is the absence of any…

组织与器官 · 定量生物学 2008-12-02 Wassily Lubashevsky , Ihor Lubashevsky , Reinhard Mahnke

In this work, we introduce an algorithmic approach to generate microvascular networks starting from larger vessels that can be reconstructed without noticeable segmentation errors. Contrary to larger vessels, the reconstruction of…

计算工程、金融与科学 · 计算机科学 2020-07-10 Tobias Köppl , Ettore Vidotto , Barbara Wohlmuth