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相关论文: Simplified calcium signaling cascade for synaptic …

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Many cells use calcium signalling to carry information from the extracellular side of the plasma membrane to targets in their interior. Since virtually all cells employ a network of biochemical reactions for Ca2+ signalling, much effort has…

神经元与认知 · 定量生物学 2009-12-17 Maurizio De Pitta` , Vladislav Volman , Herbert Levine , Eshel Ben-Jacob

Continuum models of plasticity fail to capture the richness of microstructural evolution because the continuum is a homogeneous construction. The present study shows that an alternative way is available at the mesoscale in the form of truly…

材料科学 · 物理学 2025-10-01 Afonso D. M. Barroso , Elijah Borodin , Andrey P. Jivkov

We develop a spatially explicit biophysical model of the hippocampal CA3-CA1 presynaptic bouton to study local calcium dynamics leading to vesicle fusion. A kinetic model with two calcium sensors is formulated specifically for the CA3-CA1…

神经元与认知 · 定量生物学 2010-05-02 Suhita Nadkarni , Thomas Bartol , Terrence Sejnowski , Herbert Levine

NMDA receptors (NMDA-R) typically contribute to excitatory synaptic transmission in the central nervous system. While calcium influx through NMDA-R plays a critical role in synaptic plasticity, experimental evidence indicates that…

神经元与认知 · 定量生物学 2020-02-03 David Gall , Geneviève Dupont

Most of the calcium in the body is stored in bone. The rest is stored elsewhere, and calcium signalling is one of the most important mechanisms of information propagation in the body. Yet, many questions remain open. In this work, we…

动力系统 · 数学 2017-03-03 Katerina Kaouri , Philip K. Maini , S. Jonathan Chapman

The N-methyl-D-aspartate receptor (NMDAR) is a crucial component of synaptic transmission, and its dysfunction is implicated in many neurological diseases and psychiatric conditions. NMDAR-based short-term postsynaptic plasticity (STPP) is…

神经元与认知 · 定量生物学 2023-09-28 Huilin Zhao , Sungchil Yang , Chi Chung Alan Fung

We present efficient Bayesian methods for extracting neuronal spiking information from calcium imaging data. The goal of our methods is to sample from the posterior distribution of spike trains and model parameters (baseline concentration,…

神经元与认知 · 定量生物学 2013-11-28 Eftychios A. Pnevmatikakis , Josh Merel , Ari Pakman , Liam Paninski

We present a simple biophysical model for the coupling between synaptic transmission and the local calcium concentration on an enveloping astrocytic domain. This interaction enables the astrocyte to modulate the information flow from…

神经元与认知 · 定量生物学 2007-05-23 Vladislav Volman , Eshel Ben-Jacob , Herbert Levine

Understanding how biological neural networks carry out learning using spike-based local plasticity mechanisms can lead to the development of powerful, energy-efficient, and adaptive neuromorphic processing systems. A large number of…

神经与进化计算 · 计算机科学 2022-11-08 Lyes Khacef , Philipp Klein , Matteo Cartiglia , Arianna Rubino , Giacomo Indiveri , Elisabetta Chicca

Recent years have witnessed an increasing interest in neuron-glia communication. This interest stems from the realization that glia participates in cognitive functions and information processing and is involved in many brain disorders and…

神经元与认知 · 定量生物学 2009-12-17 Maurizio De Pitta` , Mati Goldberg , Vladislav Volman , Hugues Berry , Eshel Ben-Jacob

Calcium is an ubiquitous second messenger that triggers a plethora of key physiological responses. The events are initiated in micro- or nano-sized compartments and determined by the complex interactions with calcium-binding proteins and…

亚细胞过程 · 定量生物学 2013-05-01 S. L. Mironov

The ATP-driven Plasma Membrane Calcium pump or Ca(2+)-ATPase (PMCA) is characterized by a high affinity to calcium and a low transport rate compared to other transmembrane calcium transport proteins. It plays a crucial role for calcium…

生物物理 · 物理学 2014-11-18 Michael Graupner , Frido Erler , Michael Meyer-Hermann

We introduce Spike Agreement Dependent Plasticity (SADP), a biologically inspired synaptic learning rule for Spiking Neural Networks (SNNs) that relies on the agreement between pre- and post-synaptic spike trains rather than precise…

神经与进化计算 · 计算机科学 2025-08-25 Saptarshi Bej , Muhammed Sahad E , Gouri Lakshmi , Harshit Kumar , Pritam Kar , Bikas C Das

Like many other biological processes, calcium dynamics in neurons containing an endoplasmic reticulum are governed by diffusion-reaction equations on interface-separated domains. Interface conditions are typically described by systems of…

数值分析 · 数学 2022-03-14 Qingguang Guan , Gillian Queisser

Precise spatio-temporal patterns of neuronal action potentials underly e.g. sensory representations and control of muscle activities. However, it is not known how the synaptic efficacies in the neuronal networks of the brain adapt such that…

神经元与认知 · 定量生物学 2015-02-24 Christian Albers , Maren Westkott , Klaus Pawelzik

This paper presents an extension of the BrainScaleS accelerated analog neuromorphic hardware model. The scalable neuromorphic architecture is extended by the support for multi-compartment models and non-linear dendrites. These features are…

神经与进化计算 · 计算机科学 2017-03-22 Johannes Schemmel , Laura Kriener , Paul Müller , Karlheinz Meier

Short-term synaptic plasticity (STP) is often regarded as a presynaptic filter of spikes, independent of postsynaptic activity. Recent experiments, however, indicate an associative STP that depends on pre- and postsynaptic coactivation. We…

神经元与认知 · 定量生物学 2026-05-20 Genki Shimizu , Taro Toyoizumi

The brain can learn to execute a wide variety of tasks quickly and efficiently. Nevertheless, most of the mechanisms that enable us to learn are unclear or incredibly complicated. Recently, considerable efforts have been made in…

神经与进化计算 · 计算机科学 2023-03-28 Mohammad Modiri

We propose a simple discrete stochastic model for calcium dynamics in living cells. Specifically, the calcium concentration distribution is assumed to give rise to a set of probabilities for the opening/closing of channels which release…

patt-sol · 物理学 2009-10-31 Markus Baer , Martin Falcke , Herbert Levine , Lev S. Tsimring

In the mammalian nervous system, various synaptic plasticity rules act, either individually or synergistically, and over wide-ranging timescales to dictate the processes that enable learning and memory formation. To mimic biological…

无序系统与神经网络 · 物理学 2021-06-11 Syed Ghazi Sarwat , Benedikt Kersting , Timoleon Moraitis , Vara Prasad Jonnalagadda , Abu Sebastian