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Large spatiotemporal datasets are a challenge for conventional Bayesian models because of the cubic computational complexity of the algorithms for obtaining the Cholesky decomposition of the covariance matrix in the multivariate normal…

统计计算 · 统计学 2021-04-19 Luc Villandré , Jean-François Plante , Thierry Duchesne , Patrick Brown

A common task is the determination of system parameters from spectroscopy, where one compares the experimental spectrum with calculated spectra, that depend on the desired parameters. Here we discuss an approach based on a machine learning…

量子物理 · 物理学 2022-05-04 Farhad Taher-Ghahramani , Fulu Zheng , Alexander Eisfeld

Proteins play a pivotal role in biological systems. The use of machine learning algorithms for protein classification can assist and even guide biological experiments, offering crucial insights for biotechnological applications. We…

定量方法 · 定量生物学 2024-10-24 Yizheng Wang , Yixiao Zhai , Yijie Ding , Quan Zou

In this paper we propose to numerically assess the performance of standard Gaussian approximations to probe the posterior distribution that arises from Bayesian data assimilation in petroleum reservoirs. In particular we assess the…

应用统计 · 统计学 2012-12-11 Marco A. Iglesias , Kody J. H. Law , Andrew M. Stuart

Bayesian Optimization using Gaussian Processes is a popular approach to deal with the optimization of expensive black-box functions. However, because of the a priori on the stationarity of the covariance matrix of classic Gaussian…

机器学习 · 统计学 2019-05-10 Ali Hebbal , Loic Brevault , Mathieu Balesdent , El-Ghazali Talbi , Nouredine Melab

Uncovering the distribution of magnitudes and arrival times of aftershocks is a key to comprehend the characteristics of the sequence of earthquakes, which enables us to predict seismic activities and hazard assessments. However,…

Although genome-wide association studies (GWAS) have proven powerful for comprehending the genetic architecture of complex traits, they are challenged by a high dimension of single-nucleotide polymorphisms (SNPs) as predictors, the presence…

应用统计 · 统计学 2015-09-15 Jiahan Li , Zhong Wang , Runze Li , Rongling Wu

A majority of experimental disciplines face the challenge of exploring large and high-dimensional parameter spaces in search of new scientific discoveries. Materials science is no exception; the wide variety of synthesis, processing, and…

Recent technological advances have led to a flood of new data on cosmology rich in information about the formation and evolution of the universe, e.g., the data collected in Sloan Digital Sky Survey (SDSS) for more than 200 million objects.…

宇宙学与河外天体物理 · 物理学 2009-02-25 Sabyasachi Mukhopadhyay , Sisir Roy , Sourabh Bhattacharya

Multi-model ensemble analysis integrates information from multiple climate models into a unified projection. However, existing integration approaches based on model averaging can dilute fine-scale spatial information and incur bias from…

应用统计 · 统计学 2023-04-12 Trevor Harris , Bo Li , Ryan Sriver

The combinatorial sequential Monte Carlo (CSMC) has been demonstrated to be an efficient complementary method to the standard Markov chain Monte Carlo (MCMC) for Bayesian phylogenetic tree inference using biological sequences. It is…

统计计算 · 统计学 2020-08-12 Shijia Wang , Liangliang Wang

Modern epidemiological analytics increasingly use machine learning models that offer strong prediction but often lack calibrated uncertainty. Bayesian methods provide principled uncertainty quantification, yet are viewed as difficult to…

机器学习 · 统计学 2025-11-18 Debashis Chatterjee

We demonstrate applications of the Gaussian process-based landmarking algorithm proposed in [T. Gao, S.Z. Kovalsky, and I. Daubechies, SIAM Journal on Mathematics of Data Science (2019)] to geometric morphometrics, a branch of evolutionary…

应用统计 · 统计学 2019-01-10 Tingran Gao , Shahar Z. Kovalsky , Doug M. Boyer , Ingrid Daubechies

RNA secondary structures prediction is one of the main issues in bioinformatics. It seeks to elucidate structural conserved regions within a set of RNA sequences. Unfortunately, finding an accurate conserved structure is a very hard task to…

数据结构与算法 · 计算机科学 2013-02-07 Abdesslem Layeb , Amira Boudra , Wissem Korichi , Salim Chikhi

A key challenge in spatial statistics is the analysis for massive spatially-referenced data sets. Such analyses often proceed from Gaussian process specifications that can produce rich and robust inference, but involve dense covariance…

统计方法学 · 统计学 2019-07-25 Shinichiro Shirota , Andrew O. Finley , Bruce D. Cook , Sudipto Banerjee

We show that Gaussian process regression (GPR) can be used to infer the electromagnetic (EM) duct height within the marine atmospheric boundary layer (MABL) from sparsely sampled propagation factors within the context of bistatic radars. We…

大气与海洋物理 · 物理学 2020-07-15 Hilarie Sit , Christopher J. Earls

Edge transport barriers (ETBs) in magnetically confined fusion plasmas, commonly known as pedestals, play a crucial role in achieving high confinement plasmas. However, their defining characteristic, a steep rise in plasma pressure over…

We develop a computationally efficient framework for quasi-Bayesian inference based on linear moment conditions. The approach employs a delayed acceptance Markov chain Monte Carlo (DA-MCMC) algorithm that uses a surrogate target kernel and…

统计计算 · 统计学 2026-02-18 Masahiro Tanaka

The use of Gaussian processes (GPs) is supported by efficient sampling algorithms, a rich methodological literature, and strong theoretical grounding. However, due to their prohibitive computation and storage demands, the use of exact GPs…

统计理论 · 数学 2022-07-27 Kelly R. Moran , Matthew W. Wheeler

Fossil-based palaeoclimate reconstruction is an important area of ecological science that has gained momentum in the backdrop of the global climate change debate. The hierarchical Bayesian paradigm provides an interesting platform for…

应用统计 · 统计学 2013-12-13 Sabyasachi Mukhopadhyay , Sourabh Bhattacharya