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Populations evolve by accumulating advantageous mutations. Every population has some spatial structure that can be modeled by an underlying network. The network then influences the probability that new advantageous mutations fixate.…

种群与进化 · 定量生物学 2024-01-29 Jakub Svoboda , Soham Joshi , Josef Tkadlec , Krishnendu Chatterjee

The rate of biological evolution depends on the fixation probability and on the fixation time of new mutants. Intensive research has focused on identifying population structures that augment the fixation probability of advantageous mutants.…

种群与进化 · 定量生物学 2019-03-11 Josef Tkadlec , Andreas Pavlogiannis , Krishnendu Chatterjee , Martin A. Nowak

The spatial structure of an evolving population affects which mutations become fixed. Some structures amplify selection, increasing the likelihood that beneficial mutations become fixed while deleterious mutations do not. Other structures…

Population structures can be crucial determinants of evolutionary processes. For the Moran process on graphs certain structures suppress selective pressure, while others amplify it (Lieberman et al. 2005 Nature 433 312-316). Evolutionary…

概率论 · 数学 2014-08-12 Alastair Jamieson-Lane , Christoph Hauert

Evolutionary dynamics on graphs can lead to many interesting and counterintuitive findings. We study the Moran process, a discrete time birth-death process, that describes the invasion of a mutant type into a population of wild-type…

种群与进化 · 定量生物学 2015-04-23 Laura Hindersin , Arne Traulsen

We analyze evolutionary dynamics on graphs, where the nodes represent individuals of a population. The links of a node describe which other individuals can be displaced by the offspring of the individual on that node. Amplifiers of…

种群与进化 · 定量生物学 2016-10-27 Laura Hindersin , Arne Traulsen

Population structure has been known to substantially affect evolutionary dynamics. Networks that promote the spreading of fitter mutants are called amplifiers of natural selection, and those that suppress the spreading of fitter mutants are…

物理与社会 · 物理学 2023-10-26 Jnanajyoti Bhaumik , Naoki Masuda

We consider the modified Moran process on graphs to study the spread of genetic and cultural mutations on structured populations. An initial mutant arises either spontaneously (aka \emph{uniform initialization}), or during reproduction (aka…

离散数学 · 计算机科学 2018-05-15 Andreas Pavlogiannis , Josef Tkadlec , Krishnendu Chatterjee , Martin A. Nowak

Evolution occurs in populations of reproducing individuals. In stochastic descriptions of evolutionary dynamics, such as the Moran process, individuals are chosen randomly for birth and for death. If the same type is chosen for both steps,…

种群与进化 · 定量生物学 2026-01-13 Michal Pecho , Josef Tkadlec , Martin A. Nowak

Natural selection and random drift are competing phenomena for explaining the evolution of populations. Combining a highly fit mutant with a population structure that improves the odds that the mutant spreads through the whole population…

种群与进化 · 定量生物学 2009-08-14 Valmir C. Barbosa , Raul Donangelo , Sergio R. Souza

Different evolutionary models are known to make disparate predictions for the success of an invading mutant in some situations. For example, some evolutionary mechanics lead to amplification of selection in structured populations, while…

种群与进化 · 定量生物学 2020-07-01 Francisco Herrerías-Azcué , Vicente Pérez-Muñuzuri , Tobias Galla

Evolution occurs in populations of reproducing individuals. It is well known that population structure can affect evolutionary dynamics. Traditionally, natural selection is studied between mutants that differ in reproductive rate, but are…

种群与进化 · 定量生物学 2021-11-23 Josef Tkadlec , Kamran Kaveh , Krishnendu Chatterjee , Martin A. Nowak

The population structure often impacts evolutionary dynamics. In constant-selection evolutionary dynamics between two types, amplifiers of selection are networks that promote the fitter mutant to take over the entire population, and…

物理与社会 · 物理学 2024-09-04 Jnanajyoti Bhaumik , Naoki Masuda

The Moran process is a classic stochastic process that models invasion dynamics on graphs. A single "mutant" (e.g., a new opinion, strain, social trait etc.) invades a population of residents spread over the nodes of a graph. The mutant…

数据结构与算法 · 计算机科学 2022-04-26 Joachim Brendborg , Panagiotis Karras , Andreas Pavlogiannis , Asger Ullersted Rasmussen , Josef Tkadlec

We study stochastic evolutionary game dynamics in a population of finite size. Individuals in the population are divided into two dynamically evolving groups. The structure of the population is formally described by a Wright-Fisher type…

The environment in which a population evolves can have a crucial impact on selection. We study evolutionary dynamics in finite populations of fixed size in a changing environment. The population dynamics are driven by birth and death…

种群与进化 · 定量生物学 2014-09-01 Peter Ashcroft , Philipp M Altrock , Tobias Galla

Evolutionary games on graphs describe how strategic interactions and population structure determine evolutionary success, quantified by the probability that a single mutant takes over a population. Graph structures, compared to the…

种群与进化 · 定量生物学 2017-05-08 Philipp M. Altrock , Arne Traulsen , Martin A. Nowak

Inspired by recent works on evolutionary graph theory, an area of growing interest in mathematical and computational biology, we present the first known examples of undirected structures acting as suppressors of selection for any fitness…

种群与进化 · 定量生物学 2017-11-01 Fernando Alcalde Cuesta , Pablo González Sequeiros , Álvaro Lozano Rojo

Complex spatial structure, with partially isolated subpopulations, and environment heterogeneity, such as gradients in nutrients, oxygen, and drugs, both shape the evolution of natural populations. We investigate the impact of environment…

种群与进化 · 定量生物学 2026-04-07 Cecilia Fruet , Arthur Alexandre , Alia Abbara , Claude Loverdo , Anne-Florence Bitbol

Hypergraphs have been a useful tool for analyzing population dynamics such as opinion formation and the public goods game occurring in overlapping groups of individuals. In the present study, we propose and analyze evolutionary dynamics on…

物理与社会 · 物理学 2023-10-16 Ruodan Liu , Naoki Masuda
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