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Upon hydrogen bond formation, electronic charge density is transferred between the donor and acceptor, impacting processes ranging from hydration to spectroscopy. Here we use ab initio path integral simulations to elucidate the role of…

化学物理 · 物理学 2018-11-28 Christoph Schran , Ondrej Marsalek , Thomas E. Markland

The equilibrium states of one-dimensional proton conductors in the systems with hydrogen bonds are investigated. Our extended hard-core boson lattice model includes short-range interactions between hydrogen ions, their transfer along the…

统计力学 · 物理学 2021-06-28 R. Ya. Stetsiv

Aqueous solutions of LiCl are probably the most studied electrolyte solutions related to the complexity of liquid water at low temperatures. Despite the large amount of available experimental data hardly any computational studies were…

软凝聚态物质 · 物理学 2020-04-29 Philip H. Handle

Hydrogen bonding interactions between biological chromophores and their surrounding protein and solvent environment significantly affect the photochemical pathways of the chromophore and its biological function. A common first step in the…

Hydrogen bonds are of paramount importance in the chemistry of clays, mediating the interaction between the clay surface and water, and for some materials between separate layers. It is well-established that the accuracy of a computational…

化学物理 · 物理学 2022-03-14 Pawan J. K. Kurapothula , Sam Shepherd , David M. Wilkins

We investigate crystal nucleation in supersaturated colloid suspensions using enhanced molecular dynamics simulations augmented with machine learning techniques. The simulations reveal that crystallization in the model colloidal system…

软凝聚态物质 · 物理学 2024-04-30 Vanessa J. Meraz , Ziyue Zou , Pratyush Tiwary

We developed a new physical model to predict macroscopic properties of inorganic molten systems using a realistic description of inter-atomic interactions. Unlike the conventional approach, which tends to overestimate viscosity by several…

材料科学 · 物理学 2015-06-04 Vitaly V. Chaban , Yuriy V. Pereverzev , Oleg V. Prezhdo

The coherent dynamics of bubble clusters in liquid are of fundamental and industrial importance and are elusive due to the complex interactions of disordered bubble oscillations. Here we introduce and demonstrate unsupervised learning of…

流体动力学 · 物理学 2024-06-03 Kazuki Maeda , Daniel Fuster

Hydrogen bond is often assumed to be a purely electrostatic interaction between a electron-deficient hydrogen atom and a region of high electron density. Here, for the first time, we directly image hydrogen bond in real space by…

化学物理 · 物理学 2013-02-28 Xiu Chen , Shuyi Liu , Lacheng Liu , Xiaoqing Liu , Yingxing Cai , Nianhua Liu , Li Wang

To contribute to the understanding of noncovalent binding of halogenated molecules with a biological activity, electrostatic potential (ESP) maps of more than 2,500 compounds were thoroughly analysed. A peculiar region of positive ESP,…

化学物理 · 物理学 2017-10-09 Michal H. Kolář , Paolo Carloni , Pavel Hobza

Molecular dynamics simulations are an important tool for describing the evolution of a chemical system with time. However, these simulations are inherently held back either by the prohibitive cost of accurate electronic structure theory…

化学物理 · 物理学 2018-12-20 Michael Gastegger , Philipp Marquetand

A first-principles coupled electron-nuclear dynamics simulation based on real-time, time-dependent density functional theory and Ehrenfest dynamics quantitatively repro-duces bimodal translational energy loss and angular distributions…

化学物理 · 物理学 2025-12-05 Jialong Shi , Lingjun Zhu , Florian Nitz , Oliver Bünermann , Alec M. Wodtke , Hua Guo , Bin Jiang

Our curiosity-driven desire to "see" chemical bonds dates back at least one-hundred years, perhaps to antiquity. Sweeping improvements in the accuracy of measured and predicted electron charge densities, alongside our largely bondcentric…

化学物理 · 物理学 2020-02-19 Timothy R. Wilson , Malavikha Rajivmoorthy , Jordan Goss , Sam Riddle , M. E. Eberhart

The Resonating Valence Bond theory of the chemical bond was introduced soon after the discovery of quantum mechanics and has contributed to explain the role of electron correlation within a particularly simple and intuitive approach where…

计算物理 · 物理学 2025-01-09 Sandro Sorella , Andrea Zen

Electrogenerated gas nanobubbles strongly influence the performance of electrochemical energy-conversion systems, yet their nucleation and early evolution remain poorly understood due to limitations of existing experimental and…

软凝聚态物质 · 物理学 2026-01-19 Nima Shakourifar , Nana Ofori-Opoku , Benzhong Zhao

Many experimental techniques such as tagging photodissociation and helium nanodroplet isolation spectroscopy operate at very low temperatures in order to investigate hydrogen bonding. To elucidate the differences between such ultra-cold and…

化学物理 · 物理学 2019-11-22 Christoph Schran , Dominik Marx

By means of extensive replica-exchange simulations of generic coarse-grained models for helical polymers, we systematically investigate the structural transitions into all possible helical phases for flexible and semiflexible elastic…

生物物理 · 物理学 2015-09-23 Matthew J. Williams , Michael Bachmann

New ways to treat electron correlation in electronic structure problems are discussed in the context of many-electron theory. The present work focuses primarily on static correlation. In related work, a method for including dynamical…

化学物理 · 物理学 2018-09-05 Jerry L. Whitten

We investigate the structural properties of liquid water at near ambient conditions using first-principles molecular dynamics simulations based on a semilocal density functional augmented with nonlocal van der Waals interactions. The…

软凝聚态物质 · 物理学 2016-08-01 Giacomo Miceli , Stefano de Gironcoli , Alfredo Pasquarello

Recent x-ray Compton scattering experiments in ice have provided useful information about the quantum nature of the interaction between H$_2$O monomers. The hydrogen bond is characterized by a certain amount of charge transfer which could…

材料科学 · 物理学 2007-10-11 B. Barbiellini , A. Shukla