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Tractography has become an indispensable part of brain connectivity studies. However, it is currently facing problems with reliability. In particular, a substantial amount of nerve fiber reconstructions (streamlines) in tractograms produced…

计算机视觉与模式识别 · 计算机科学 2023-07-25 Antonia Hain , Daniel Jörgens , Rodrigo Moreno

Scattered Light Imaging (SLI) is a novel approach for microscopically revealing the fibre architecture of unstained brain sections. The measurements are obtained by illuminating brain sections from different angles and measuring the…

图像与视频处理 · 电气工程与系统科学 2022-04-13 Esteban Vaca , Miriam Menzel , Katrin Amunts , Markus Axer , Timo Dickscheid

Axons in white matter have been shown to have varying geometries within a bundle using ex vivo imaging techniques, but what does this mean for diffusion MRI (dMRI) based spherical deconvolution (SD)? SD attempts to estimate the fibre…

医学物理 · 物理学 2022-03-04 Ross Callaghan , Daniel C. Alexander , Marco Palombo , Hui Zhang

White matter tractography is an advanced neuroimaging technique that reconstructs the 3D white matter pathways of the brain from diffusion MRI data. It can be framed as a pathfinding problem aiming to infer neural fiber trajectories from…

计算机视觉与模式识别 · 计算机科学 2025-09-23 Itzik Waizman , Yakov Gusakov , Itay Benou , Tammy Riklin Raviv

We present DeepTract, a deep-learning framework for estimating white matter fibers orientation and streamline tractography. We adopt a data-driven approach for fiber reconstruction from diffusion weighted images (DWI), which does not assume…

计算机视觉与模式识别 · 计算机科学 2019-10-18 Itay Benou , Tammy Riklin-Raviv

Streamline classification is essential to identify anatomically meaningful white matter tracts from diffusion MRI (dMRI) tractography. However, current streamline classification methods rely primarily on the geometric features of the…

计算机视觉与模式识别 · 计算机科学 2025-11-25 Haotian Yan , Bocheng Guo , Jianzhong He , Nir A. Sochen , Ofer Pasternak , Lauren J O'Donnell , Fan Zhang

Diffusion Magnetic Resonance Imaging (DMRI) is the only non-invasive imaging technique which is able to detect the principal directions of water diffusion as well as neurites density in the human brain. Exploiting the ability of Spherical…

计算机视觉与模式识别 · 计算机科学 2017-09-04 Mauro Zucchelli , Maxime Descoteaux , Gloria Menegaz

Current brain white matter fiber tracking techniques show a number of problems, including: generating large proportions of streamlines that do not accurately describe the underlying anatomy; extracting streamlines that are not supported by…

图像与视频处理 · 电气工程与系统科学 2021-08-03 Jon Haitz Legarreta , Laurent Petit , François Rheault , Guillaume Theaud , Carl Lemaire , Maxime Descoteaux , Pierre-Marc Jodoin

An image-based technique for measuring the complex field in the pupil of an imaging system is presented. Two point source images, one with a small modification introduced in the pupil, are combined using a simple and non-iterative…

光学 · 物理学 2013-09-27 Johanan L. Codona

Three dimensional Polarized Light Imaging (3D-PLI) is an optical technique which allows mapping the spatial fiber architecture of fibrous postmortem tissues, at sub-millimeter resolutions. Here, we propose an analytical and fast approach to…

Deep Convolutional Neural Networks (DCNNs) are capable of obtaining powerful image representations, which have attracted great attentions in image recognition. However, they are limited in modeling orientation transformation by the internal…

计算机视觉与模式识别 · 计算机科学 2021-02-03 Yalan Qin , Guorui Feng , Hanzhou Wu , Yanli Ren , Xinpeng Zhang

Inferring which pathways are affected by a brain lesion is key for both pre and post-treatment planning. However, many disruptive lesions cause changes in the tissue that interrupt tractography algorithms. In such cases, aggregating…

定量方法 · 定量生物学 2021-10-05 Guillermo Gallardo , Gaston Zanitti , Mat Higger , Sylvain Bouix , Demian Wassermann

Orientation mapping is a widely used technique for revealing the microstructure of a polycrystalline sample. The crystalline orientation at each point in the sample is determined by analysis of the diffraction pattern, a process known as…

数学物理 · 物理学 2017-10-11 Peter Mahler Larsen , Søren Schmidt

Diffusion magnetic resonance imaging (dMRI) and tractography provide means to study the anatomical structures within the white matter of the brain. When studying tractography data across subjects, it is usually necessary to align, i.e. to…

机器学习 · 统计学 2016-02-01 Thien Bao Nguyen , Emanuele Olivetti , Paolo Avesani

Parcellation of white matter tractography provides anatomical features for disease prediction, anatomical tract segmentation, surgical brain mapping, and non-imaging phenotype classifications. However, parcellation does not always reach…

计算机视觉与模式识别 · 计算机科学 2024-09-23 Yui Lo , Yuqian Chen , Fan Zhang , Dongnan Liu , Leo Zekelman , Suheyla Cetin-Karayumak , Yogesh Rathi , Weidong Cai , Lauren J. O'Donnell

With respect to biological findings underlying fly's physiology in the past decade, we present a directionally selective neural network, with a feed-forward structure and entirely low-level visual processing, so as to implement direction…

神经与进化计算 · 计算机科学 2018-08-24 Qinbing Fu , Nicola Bellotto , Shigang Yue

Accurate cerebrovascular segmentation from Magnetic Resonance Angiography (MRA) and Computed Tomography Angiography (CTA) is of great significance in diagnosis and treatment of cerebrovascular pathology. Due to the complexity and topology…

图像与视频处理 · 电气工程与系统科学 2024-11-22 Zhanqiang Guo , Yao Luan , Jianjiang Feng , Wangsheng Lu , Yin Yin , Guangming Yang , Jie Zhou

In this study, we propose a framework for chirp-based communications by exploiting discrete Fourier transform-spread orthogonal frequency division multiplexing (DFT-s-OFDM). We show that a well-designed frequency-domain spectral shaping…

信号处理 · 电气工程与系统科学 2020-11-24 Alphan Sahin , Nozhan Hosseini , Hosseinali Jamal , Safi Shams Muhtasimul Hoque , David W. Matolak

We consider application of the discrete Fourier transform-spread orthogonal frequency-division multiplexing (DFT-spread OFDM) technique to high-speed fiber optic communications. The DFT-spread OFDM is a form of single-carrier technique that…

信息论 · 计算机科学 2011-03-01 Fanggang Wang , Xiaodong Wang

Optical time-domain reflectometry (OTDR) has been widely used for characterizing fiber optical links and for detecting and locating fiber faults. OTDR traces are prone to be distorted by different kinds of noise, causing blurring of the…

信号处理 · 电气工程与系统科学 2022-03-24 Khouloud Abdelli , Helmut Griesser , Carsten Tropschug , Stephan Pachnicke