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The glassy cytoplasm, crowded with bio-macromolecules, is fluidized in living cells by mechanical energy derived from metabolism. Characterizing the living cytoplasm as a non-equilibrium system is crucial in elucidating the intricate…

生物物理 · 物理学 2023-07-28 K. Umeda , K. Nishizawa , W. Nagao , S. Inokuchi , Y. Sugino , H. Ebata , D. Mizuno

A simple model of an active colloid consisting of dumbbell-shaped particles that cyclically change their length without propelling themselves is proposed and analyzed. At nanoscales, it represents an idealization for bacterial cytoplasm or…

适应与自组织系统 · 物理学 2020-01-28 Yuki Koyano , Hiroyuki Kitahata , Alexander S. Mikhailov

Driven granular systems readily form glassy phases at high particle volume fractions and low driving amplitudes. We use computer simulations of a driven granular glass to evidence a re-entrance melting transition into a fluid state, which,…

软凝聚态物质 · 物理学 2013-02-19 Jan Plagge , Claus Heussinger

Recent work on particle-based models of tissues has suggested that any finite rate of cell division and cell death is sufficient to fluidize an epithelial tissue. At the same time, experimental evidence has indicated the existence of glassy…

软凝聚态物质 · 物理学 2019-05-07 Michael Czajkowski , Daniel M. Sussman , M. Cristina Marchetti , M. Lisa Manning

Dynamics is central to living systems. In the last two decades, experiments have revealed that the dynamics in diverse biological systems - from intracellular cytoplasm to cellular and organismal aggregates - are remarkably similar to that…

软凝聚态物质 · 物理学 2024-03-12 Souvik Sadhukhan , Subhodeep Dey , Smarajit Karmakar , Saroj Kumar Nandi

Bacterial assemblies exhibit rich collective behaviors that control their biological functions, making them a relevant object of study from an active matter physics perspective. Dense bacterial suspensions self-organize into distinct…

软凝聚态物质 · 物理学 2025-04-08 Martin Maliet , Nicolas Fix-Boulier , Ludovic Berthier , Maxime Deforet

We study by Molecular Dynamics simulation a dense one-component system of particles confined on a spherical substrate. We more specifically investigate the evolution of the structural and dynamical properties of the system when changing the…

软凝聚态物质 · 物理学 2018-05-23 Julien-Piera Vest , Gilles Tarjus , Pascal Viot

We investigate how structural relaxation in mixtures with strong dynamical asymmetry is affected by the microscopic dynamics. Brownian and Newtonian dynamics simulations of dense mixtures of fast and slow hard spheres reveal a striking…

软凝聚态物质 · 物理学 2017-10-02 Suvendu Mandal , Thomas Franosch , Thomas Voigtmann

Densely packed, motile bacteria can adopt collective states not seen in conventional, passive materials. These states remain in many ways mysterious, and their physical characterization can aid our understanding of natural bacterial…

Dense assemblies of self-propelled particles undergo a nonequilibrium form of glassy dynamics. Physical intuition suggests that increasing departure from equilibrium due to active forces fluidifies a glassy system. We falsify this belief by…

软凝聚态物质 · 物理学 2017-12-08 Ludovic Berthier , Elijah Flenner , Grzegorz Szamel

Chiral active matter is enjoying a rapid increase of interest, spurred by the rich variety of asymmetries that can be attained in e.g. the shape or self-propulsion mechanism of active particles. Though this has already led to the observance…

软凝聚态物质 · 物理学 2023-02-15 Vincent E. Debets , Hartmut Löwen , Liesbeth M. C. Janssen

Dense active systems are widespread in nature, examples range from bacterial colonies to biological tissues. Dense clusters of active particles can be obtained by increasing the packing fraction of the system or taking advantage of a…

软凝聚态物质 · 物理学 2022-04-13 Matteo Paoluzzi , Demian Levis , Ignacio Pagonabarraga

The dynamical properties of the site frustrated percolation model are investigated and compared with those of glass forming liquids. When the density of the particles on the lattice becomes high enough, the dynamics of the model becomes…

统计力学 · 物理学 2009-10-30 S. Scarpetta , A. de Candia , A. Coniglio

Cell migration is important in many biological processes, including embryonic development, cancer metastasis, and wound healing. In these tissues, a cell's motion is often strongly constrained by its neighbors, leading to glassy dynamics.…

生物物理 · 物理学 2016-01-20 Dapeng Bi , J. H. Lopez , J. M. Schwarz , M. Lisa Manning

We use event driven simulations to analyze glassy dynamics as a function of density and energy dissipation in a two-dimensional bidisperse granular fluid under stationary conditions. Clear signatures of a glass transition are identified,…

统计力学 · 物理学 2011-10-05 Iraj Gholami , Andrea Fiege , Annette Zippelius

Despite the enormous theoretical and application interests, a fundamental understanding of the glassy dynamics remains elusive. The static properties of glassy and ordinary liquids are similar, but their dynamics are dramatically different.…

软凝聚态物质 · 物理学 2023-11-21 Puneet Pareek , Monoj Adhikari , Chandan Dasgupta , Saroj Kumar Nandi

Kinetic lattice-gas models display fragile glass behavior, in spite of their trivial Gibbs-Boltzmann measure. This suggests that the nature of glass transition might be, at least in some cases, understood in purely kinetic or dynamical…

统计力学 · 物理学 2009-10-31 Mauro Sellitto

We analyze a simple dynamical model of glasses, based on the idea that each particle is trapped in a local potential well, which itself evolves due to hopping of neighbouring particles. The glass transition is signalled by the fact that the…

凝聚态物理 · 物理学 2009-10-28 Jean-Philippe Bouchaud , Alain Comtet , Cécile Monthus

Extensive molecular dynamics simulations show that a short-range central potential, suited to model C60, undergoes a high temperature transition to a glassy phase characterized by the positional disorder of the constituent particles.…

软凝聚态物质 · 物理学 2007-05-23 Maria C. Abramo , Carlo Caccamo , Dino Costa , Romina Ruberto

We study bidisperse colloidal suspensions confined within glass microcapillary tubes to model the glass transition in confined cylindrical geometries. We use high speed three-dimensional confocal microscopy to observe particle motions for a…

软凝聚态物质 · 物理学 2013-02-28 Nabiha Saklayen , Gary L. Hunter , Kazem V. Edmond , Eric R. Weeks
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