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We present a general framework for adaptive allocation of viral tests in social contact networks. We pose and solve several complementary problems. First, we consider the design of a social sensing system whose objective is the early…

社会与信息网络 · 计算机科学 2020-11-05 Pau Batlle , Joan Bruna , Carlos Fernandez-Granda , Victor M. Preciado

Strategic test allocation plays a major role in the control of both emerging and existing pandemics (e.g., COVID-19, HIV). Widespread testing supports effective epidemic control by (1) reducing transmission via identifying cases, and (2)…

统计方法学 · 统计学 2022-12-06 Ivana Malenica , Jeremy R. Coyle , Mark J. van der Laan , Maya L. Petersen

In the age of digital epidemiology, epidemiologists are faced by an increasing amount of data of growing complexity and dimensionality. Machine learning is a set of powerful tools that can help to analyze such enormous amounts of data. This…

Identifying the infection status of each individual during infectious diseases informs public health management. However, performing frequent individual-level tests may not be feasible. Instead, sparse and sometimes group-level tests are…

应用统计 · 统计学 2023-06-06 Zahra Gholamalian , Zeinab Maleki , MasoudReza Hashemi , Pouria Ramazi

Epidemiologists aiming to model the dynamics of global events face a significant challenge in identifying the factors linked with anomalies such as disease outbreaks. In this paper, we present a novel method for identifying the most…

机器学习 · 计算机科学 2021-09-20 Aboli Marathe , Saloni Parekh , Harsh Sakhrani

A combination of traditional image processing methods with advanced neural networks concretes a predictive and preventive healthcare paradigm. This study offers rapid, accurate, and non-invasive diagnostic solutions that can significantly…

Vaccination and outbreak monitoring are essential tools for preventing and minimizing outbreaks of infectious diseases. Targeted strategies, where the individuals most important for monitoring or preventing outbreaks are selected for…

物理与社会 · 物理学 2016-03-04 Enys Mones , Arkadiusz Stopczynski , Alex Pentland , Nathaniel Hupert , Sune Lehmann

Processes such as disease propagation and information diffusion often spread over some latent network structure which must be learned from observation. Given a set of unlabeled training examples representing occurrences of an event type of…

机器学习 · 统计学 2017-01-09 Sriram Somanchi , Daniel B. Neill

Background: The global spread of the severe acute respiratory syndrome (SARS) epidemic has clearly shown the importance of considering the long-range transportation networks in the understanding of emerging diseases outbreaks. The…

其他定量生物学 · 定量生物学 2008-01-16 Vittoria Colizza , Alain Barrat , Marc Barthelemy , Alessandro Vespignani

The accurate estimation of time-varying transmission rates is fundamental for understanding infectious disease dynamics and implementing effective public health interventions. To this end, we propose an improved inverse method for…

种群与进化 · 定量生物学 2025-12-17 Shuanglin Jing , Yuting Huang , Hai-Feng Huo

The increased success of Deep Learning (DL) has recently sparked large-scale deployment of DL models in many diverse industry segments. Yet, a crucial weakness of supervised model is the inherent difficulty in handling out-of-distribution…

机器学习 · 计算机科学 2021-07-15 Lixuan Yang , Dario Rossi

Capturing the structured mixing within a population is key to the reliable projection of infectious disease dynamics and hence informed control. Both heterogeneity in the number of contacts and age-structured mixing have been repeatedly…

社会与信息网络 · 计算机科学 2026-03-17 Luke Murray Kearney , Emma L Davis , Matt J Keeling

Forecasting infectious disease outbreaks is hard. Forecasting emerging infectious diseases with limited historical data is even harder. In this paper, we investigate ways to improve emerging infectious disease forecasting under operational…

A particular challenge for disease progression modeling is the heterogeneity of a disease and its manifestations in the patients. Existing approaches often assume the presence of a single disease progression characteristics which is…

机器学习 · 计算机科学 2022-07-26 Taha Ceritli , Andrew P. Creagh , David A. Clifton

Continuous-time multistate models are widely used for analyzing interval-censored data on disease progression over time. Sometimes, diseases manifest differently and what appears to be a coherent collection of symptoms is the expression of…

统计方法学 · 统计学 2024-10-08 Yidan Shi , Leilei Zeng , Mary E. Thompson , Suzanne L. Tyas

The spread of an undesirable contact process, such as an infectious disease (e.g. COVID-19), is contained through testing and isolation of infected nodes. The temporal and spatial evolution of the process (along with containment through…

机器学习 · 计算机科学 2023-03-24 Xingran Chen , Hesam Nikpey , Jungyeol Kim , Saswati Sarkar , Shirin Saeedi-Bidokhti

Objectives. Sustainable management of plant diseases is an open challenge which has relevant economic and environmental impact. Optimal strategies rely on human expertise for field scouting under favourable conditions to assess the current…

计算机视觉与模式识别 · 计算机科学 2021-12-22 Alessandro Benfenati , Paola Causin , Roberto Oberti , Giovanni Stefanello

Purveyors of malicious network attacks continue to increase the complexity and the sophistication of their techniques, and their ability to evade detection continues to improve as well. Hence, intrusion detection systems must also evolve to…

密码学与安全 · 计算机科学 2020-02-20 Ahmed Shafee , Mohamed Baza , Douglas A. Talbert , Mostafa M. Fouda , Mahmoud Nabil , Mohamed Mahmoud

Various and ubiquitous information systems are being used in monitoring, exchanging, and collecting information. These systems are generating massive amount of event sequence logs that may help us understand underlying phenomenon. By…

机器学习 · 统计学 2018-07-13 Yihuang Kang , Vladimir Zadorozhny

The advent of the coronavirus pandemic has sparked the interest in predictive models capable of forecasting virus-spreading, especially for boosting and supporting decision-making processes. In this paper, we will outline the main Deep…