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We consider the $k$-Clustering problem, which is for a given multiset of $n$ vectors $X\subset \mathbb{Z}^d$ and a nonnegative number $D$, to decide whether $X$ can be partitioned into $k$ clusters $C_1, \dots, C_k$ such that the cost…

Understanding how a vertex relates to a set of vertices is a fundamental task in graph analysis. Given a graph $G$ and a vertex set $X \subseteq V(G)$, consider the collection of subsets of the form $N(u) \cap X$ where $u$ ranges over all…

A new efficient algorithm is presented for finding all simple cycles that satisfy a length constraint in a directed graph. When the number of vertices is non-trivial, most cycle-finding problems are of practical interest for sparse graphs…

The graph parameter vertex integrity measures how vulnerable a graph is to a removal of a small number of vertices. More precisely, a graph with small vertex integrity admits a small number of vertex removals to make the remaining connected…

Motivated by the recent rapid growth of research for algorithms to cluster multi-layer and temporal graphs, we study extensions of the classical Cluster Editing problem. In Multi-Layer Cluster Editing we receive a set of graphs on the same…

Graphlets of order $k$ in a graph $G$ are connected subgraphs induced by $k$ nodes (called $k$-graphlets) or by $k$ edges (called edge $k$-graphlets). They are among the interesting subgraphs in network analysis to get insights on both the…

The concept of $k$-defective clique, a relaxation of clique by allowing up-to $k$ missing edges, has been receiving increasing interests recently. Although the problem of finding the maximum $k$-defective clique is NP-hard, several…

We propose a novel graph clustering method guided by additional information on the underlying structure of the clusters (or communities). The problem is formulated as the matching of a graph to a template with smaller dimension, hence…

This work introduces two techniques for the design and analysis of branching algorithms, illustrated through the case study of the Vertex Cover problem. First, we present a method for automatically generating branching rules through a…

We consider the fundamental problem of detecting/counting copies of a fixed pattern graph in a host graph. The recent progress on this problem has not included complete pattern graphs, i.e., cliques (and their complements, i.e., edge-free…

It is known that the problem of deleting at most k vertices to obtain a proper interval graph (Proper Interval Vertex Deletion) is fixed parameter tractable. However, whether the problem admits a polynomial kernel or not was open. Here, we…

We investigate the parameterized complexity of Vertex Cover parameterized by the difference between the size of the optimal solution and the value of the linear programming (LP) relaxation of the problem. By carefully analyzing the change…

Vertex deletion and edge deletion problems play a central role in Parameterized Complexity. Examples include classical problems like Feedback Vertex Set, Odd Cycle Transversal, and Chordal Deletion. Interestingly, the study of edge…

We present a deterministic algorithm which, given a graph G with n vertices and an integer 1<m < n, computes in n^{O(ln m)} time the sum of weights w(S) over all m-subsets S of the set of vertices of G, where w(S)=exp{gamma t m +O(1/m)}…

We use a cluster ensemble to determine the number of clusters, k, in a group of data. A consensus similarity matrix is formed from the ensemble using multiple algorithms and several values for k. A random walk is induced on the graph…

We consider the problem of finding a Hamiltonian path or cycle with precedence constraints in the form of a partial order on the vertex set. We study the complexity for graph width parameters for which the ordinary problems…

An independent dominating set D of a graph G = (V,E) is a subset of vertices such that every vertex in V \ D has at least one neighbor in D and D is an independent set, i.e. no two vertices of D are adjacent in G. Finding a minimum…

In the Topological Minor Deletion (TM-Deletion) problem input consists of an undirected graph $G$, a family of undirected graphs ${\cal F}$ and an integer $k$. The task is to determine whether $G$ contains a set of vertices $S$ of size at…

A graph is $k$-degenerate if any induced subgraph has a vertex of degree at most $k$. In this paper we prove new algorithms for cliques and similar structures for these graphs. We design linear time Fixed-Parameter Tractable algorithms for…

In the Vertex Planarization problem one asks to delete the minimum possible number of vertices from an input graph to obtain a planar graph. The parameterized complexity of this problem, parameterized by the solution size (the number of…