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Biological membranes are shaped by various proteins that either generate inward or outward membrane curvature. In this article, we investigate the membrane morphologies induced by mixtures of arc-shaped particles with coarse-grained…

亚细胞过程 · 定量生物学 2020-04-03 Francesco Bonazzi , Carol K. Hall , Thomas R. Weikl

Cellular automata have been useful artificial models for exploring how relatively simple rules combined with spatial memory can give rise to complex emergent patterns. Moreover, studying the dynamics of how rules emerge under artificial…

元胞自动机与格子气 · 物理学 2014-07-11 Theodore P. Pavlic , Alyssa M. Adams , Paul C. W. Davies , Sara Imari Walker

Experimental evidence shows that there is a feedback between cell shape and cell motion. How this feedback impacts the collective behavior of dense cell monolayers remains an open question. We investigate the effect of a feedback that tends…

Edge reconstruction modifies the electronic properties of finite graphene samples. We formulate a low-energy theory of the reconstructed zigzag edge by deriving the modified boundary condition to the Dirac equation. If the unit cell size of…

介观与纳米尺度物理 · 物理学 2013-07-09 J. A. M. van Ostaay , A. R. Akhmerov , C. W. J. Beenakker , M. Wimmer

The innumerable shapes of plant leaves present a challenge to the explanatory power of biophysical theory. A model is needed that can produce these shapes with a small set of parameters. This paper presents a simple model of leaf shape…

组织与器官 · 定量生物学 2010-04-27 David A. Young

We study the physics of 2 and 3 mutually intersecting conformal defects forming wedges and corners in general dimension. For 2 defects we derive the beta function of the edge interactions for infinite and semi-infinite wedges and study them…

高能物理 - 理论 · 物理学 2026-03-03 Tom Shachar

Cellular automata (CA) have been utilized for decades as discrete models of many physical, mathematical, chemical, biological, and computing systems. The most widely known form of CA, the elementary cellular automaton (ECA), has been…

元胞自动机与格子气 · 物理学 2013-10-15 Lucas Kang

Topological and geometrical properties and the associated topological defects find a rapidly growing interest in studying the interplay between mechanics and the collective behavior of cells on the tissue level. We here test if well studied…

软凝聚态物质 · 物理学 2023-09-06 Dennis Wenzel , Simon Praetorius , Axel Voigt

This paper completes a fundamental construction in Alexandrov geometry. Previously we gave a new construction of metric spaces with curvature bounds either above or below, namely warped products with intrinsic metric space base and fiber,…

微分几何 · 数学 2017-02-09 Stephanie B. Alexander , Richard L. Bishop

We present a general theory for the equilibrium structure of cylindrical tubules and helical ribbons of chiral lipid membranes. This theory is based on a continuum elastic free energy that permits variations in the direction of molecular…

凝聚态物理 · 物理学 2009-10-28 J. V. Selinger , F. C. MacKintosh , J. M. Schnur

We have discovered a novel transition rule for binary cellular automata (CA) that yields self-replicating structures across two spatial and temporal scales from sparsely populated random initial conditions. Lower-level, shapeshifting…

元胞自动机与格子气 · 物理学 2023-06-01 Bo Yang

We demonstrate how concepts of statistical mechanics of interacting particles can have important implications in the choice of interaction potentials to model qualitative properties of cell aggregates in theoretical biology. We illustrate…

细胞行为 · 定量生物学 2017-06-29 J. A. Carrillo , A. Colombi , M. Scianna

Electric pulses in biological cells (action potentials) have been reported to be accompanied by a propagating cell-surface deformation with a nano-scale amplitude. Typically, this cell surface is covered by external layers of polymer…

生物物理 · 物理学 2022-11-15 Matan Mussel , Christian Fillafer , Gal Ben-Porath , Matthias F. Schneider

We study genus 2 covers of relative elliptic curves over an arbitrary base in which 2 is invertible. Particular emphasis lies on the case that the covering degree is 2. We show that the data in the "basic construction" of genus 2 covers of…

代数几何 · 数学 2007-05-23 Claus Diem

We investigate how thin sheets of arbitrary shapes morph under the isotropic in-plane expansion of their top surface, which may represent several stimuli such as nonuniform heating, local swelling and differential growth. Inspired by…

软凝聚态物质 · 物理学 2015-11-02 Matteo Pezzulla , Gabriel P. Smith , Paola Nardinocchi , Douglas P. Holmes

Main subject of the paper is a (strong) Morse function on a compact manifold with boundary. We construct a cellular structure and discuss its algebraic properties in this paper. Also we get an estimation on Arnold's question on a number of…

几何拓扑 · 数学 2022-01-07 Petr E. Pushkar

As the cover of embryos and adult organisms, epithelial tissues are subjected to substantial mechanical forces in tissue morphogenesis. However, the finite deformation behaviors of epithelial tissues remain largely unexplored. This study…

生物物理 · 物理学 2025-12-29 Yuan He , Shi-Lei Xue

We study a class of corner growth models in which the weights are either all exponentially or all geometrically distributed. The parameter of the distribution at site $(i, j)$ is $a_i+b_j$ in the exponential case and $a_ib_j$ in the…

概率论 · 数学 2016-12-28 Elnur Emrah

In this paper, linear Cellular Automta (CA) rules are recursively generated using a binary tree rooted at "0". Some mathematical results on linear as well as non-linear CA rules are derived. Integers associated with linear CA rules are…

元胞自动机与格子气 · 物理学 2012-09-04 Birendra Kumar Nayak , Sudhakar Sahoo , Sagarika Biswal

We study the algebraic invariants namely depth, Stanley depth, regularity and projective dimension of the residue class rings of the edge ideals associated with the corona product of various classes of graphs with any graph. We also give an…

交换代数 · 数学 2023-07-06 Bakhtawar Shaukat , Muhammad Ishaq , Ahtasham Ul Haq , Zahid Iqbal