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In this work we monitor the catalytic mechanism of P-glycoprotein (Pgp) using single-molecule fluorescence resonance energy transfer (FRET). Pgp, a member of the ATP binding cassette family of transport proteins, is found in the plasma…

生物大分子 · 定量生物学 2015-05-27 Stefan Ernst , Brandy Verhalen , Nawid Zarrabi , Stephan Wilkens , Michael Boersch

We present molecular dynamics simulations of a simple model for polymer melts with intramolecular barriers. We investigate structural relaxation as a function of the barrier strength. Dynamic correlators can be consistently analyzed within…

软凝聚态物质 · 物理学 2009-11-13 Marco Bernabei , Angel J. Moreno , Juan Colmenero

Development of the new antimicrobial agents against antibiotic resistance pathogens is the nowadays challenge. Antimicrobial peptides (AMP) occur as important defence agents in many organisms and offer a viable alternative to conventional…

生物大分子 · 定量生物学 2013-07-24 M. Pirtskhalava , B. Vishnepolsky , M. Grigolava

From the microscopic scale to the petroleum-reservoir scale, the interfacial phenomena of the crude oil-water-rock system crucially control an immiscible flow in a porous reservoir. One of the key mechanisms is crude oil droplet…

流体动力学 · 物理学 2024-06-28 Suparit Tangparitkul , Anupong Sukee , Jiatong Jiang , David Harbottle

Biological systems achieve adaptive mechanical responses through reaction-diffusion processes that couple chemical wave propagation to structural transitions. Although synthetic hydrogels with enzymatic reactions offer a platform for…

软凝聚态物质 · 物理学 2026-03-31 Natascha Gray , Zoe Grämiger , André R. Studart , Rafael Libanori

Microgels are often discussed as well-suited model system for soft colloids. In contrast to rigid spheres, the microgel volume and, coupled to this, the volume fraction in dispersion can be manipulated by external stimuli. This behavior is…

Intrinsically disordered proteins (IDPs) are typically low in nonpolar/hydrophobic but relatively high in polar, charged, and aromatic amino acid compositions. Some IDPs undergo liquid-liquid phase separation in the aqueous milieu of the…

生物大分子 · 定量生物学 2017-05-19 Yi-Hsuan Lin , Jianhui Song , Julie D. Forman-Kay , Hue Sun Chan

Micron-sized hard core-soft shell hybrid microgels are promising model systems for studies of soft matter as they enable in-situ optical investigations and their structures/morphologies can be engineered with a great variety. Yet, protocols…

软凝聚态物质 · 物理学 2022-08-25 Keumkyung Kuk , Lukas Gregel , Vahan Abgarjan , Caspar Croonenbrock , Sebastian Hänsch , Matthias Karg

Unstructured proteins can modulate cellular responses to environmental conditions by undergoing coil-globule transitions and phase separation. However, the molecular mechanisms of these phenomena still need to be fully understood. Here, we…

软凝聚态物质 · 物理学 2023-06-28 Bernat Durà Faulí , Valentino Bianco , Giancarlo Franzese

The activity of metal catalysts depends sensitively on dynamic structural changes that occur during operating conditions. The mechanistic understanding underlying such transformations in small Pt nanoparticles (NPs) of $\sim1-5$ nm in…

Mechanically interlocked polymers (MIPs) are a novel class of polymer structures in which the components are connected by mechanical bonds instead of covalent bonds. We measure the single-molecule rheological properties of polyrotaxanes,…

软凝聚态物质 · 物理学 2025-12-19 Ali Seyedi , Alex Albaugh

The electrostatic complexation between DOTAP-DOPC unilamellar liposomes and an oppositely charged polyelectrolyte (NaPA) has been investigated in a wide range of the liposome surface charge density. We systematically characterized the…

软凝聚态物质 · 物理学 2015-03-11 Simona Sennato , Laura Carlini , Domenico Truzzolillo , Federico Bordi

Ultrafast non-equilibrium dynamics offer a route to study the microscopic interactions that govern macroscopic behavior. In particular, photo-induced phase transitions (PIPTs) in solids provide a test case for how forces, and the resulting…

Cells make use of semi-flexible biopolymers such as actin or intermediate filaments to control their local viscoelastic response by dynamically adjusting the concentration and type of cross-linker molecules. The microstructure of the…

软凝聚态物质 · 物理学 2009-11-13 Yuxia Luan , Oliver Lieleg , Bernd Wagner , Andreas R. Bausch

The use of ultrafast pump-probe conductivity (PPC) for studies of photoelectron dynamics in nonpolar molecular liquids has been based upon the perturbation of geminate recombination dynamics of trapped electrons by their laser…

化学物理 · 物理学 2007-05-23 Ilya A. Shkrob , Leonid Ryzhik

In modern applications of heterogeneous liquid-phase nanocatalysis, the catalysts (e.g., metal nanoparticles) need to be typically affixed to a colloidal carrier system for stability and easy handling. "Passive carriers" (e.g., simple…

化学物理 · 物理学 2020-03-23 Matej Kanduc , Won Kyu Kim , Rafael Roa , Joachim Dzubiella

Microgels are complex macromolecules. These colloid-sized polymer networks possess internal degrees of freedom and, depending on the polymer(s) they are made of, can acquire a responsiveness to variations of the environment (temperature,…

软凝聚态物质 · 物理学 2019-02-15 L. Rovigatti , N. Gnan , L. Tavagnacco , A. J. Moreno , E. Zaccarelli

We investigated the surface structure of hydrogels of poly(N,N-dimethylacrylamide) (PDMA) hydrogels synthesized and cross-linked simultaneously by redox free radical polymerization. We demonstrate the existence of a less cross-linked layer…

软凝聚态物质 · 物理学 2017-01-24 Guillaume Sudre , Dominique Hourdet , Fabrice Cousin , Costantino Creton , Yvette Tran

Nitrogen-bearing polycyclic aromatic hydrocarbons (N-PAHs) are key precursors to complex organic molecules in both the interstellar medium and the nitrogen-rich planetary atmospheres. Despite the recent detections of nitrogen-functionalized…

The diffusion of molecules (penetrants) of variable size, shape, and chemistry through dense crosslinked polymer networks is a fundamental scientific problem that is broadly relevant in materials, polymer, physical and biological chemistry.…