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In this article, we propose a novel strategy for conducting variable selection without prior model topology knowledge using the knockoff method with boosted tree models. Our method is inspired by the original knockoff method, where the…

统计方法学 · 统计学 2020-02-24 Tao Jiang , Yuanyuan Li , Alison A. Motsinger-Reif

Algorithms that ensure reproducible findings from large-scale, high-dimensional data are pivotal in numerous signal processing applications. In recent years, multivariate false discovery rate (FDR) controlling methods have emerged,…

统计方法学 · 统计学 2024-01-31 Jasin Machkour , Michael Muma , Daniel P. Palomar

The recent paper Cand\`es et al. (2018) introduced model-X knockoffs, a method for variable selection that provably and non-asymptotically controls the false discovery rate with no restrictions or assumptions on the dimensionality of the…

统计方法学 · 统计学 2020-06-16 Dongming Huang , Lucas Janson

Although sparse autoencoders (SAEs) are crucial for identifying interpretable features in neural networks, it is still challenging to distinguish between real computational patterns and erroneous correlations. We introduce Model-X knockoffs…

机器学习 · 计算机科学 2025-11-18 Tsogt-Ochir Enkhbayar

In many applications, we need to study a linear regression model that consists of a response variable and a large number of potential explanatory variables and determine which variables are truly associated with the response. In 2015,…

统计方法学 · 统计学 2019-07-23 Jiajie Chen , Anthony Hou , Thomas Y. Hou

In 2015, Barber and Candes introduced a new variable selection procedure called the knockoff filter to control the false discovery rate (FDR) and prove that this method achieves exact FDR control. Inspired by the work of Barber and Candes…

统计方法学 · 统计学 2019-07-23 Jiajie Chen , Anthony Hou , Thomas Y. Hou

Controlled feature selection aims to discover the features a response depends on while limiting the false discovery rate (FDR) to a predefined level. Recently, multiple deep-learning-based methods have been proposed to perform controlled…

机器学习 · 统计学 2022-10-24 Derek Hansen , Brian Manzo , Jeffrey Regier

Knockoff variable selection is a powerful framework that creates synthetic knockoff variables to mirror the correlation structure of the observed features, enabling principled control of the false discovery rate in variable selection.…

统计方法学 · 统计学 2025-08-21 Evan Mason , Zhe Fei

Addressing the simultaneous identification of contributory variables while controlling the false discovery rate (FDR) in high-dimensional data is a crucial statistical challenge. In this paper, we propose a novel model-free variable…

统计方法学 · 统计学 2024-04-23 Yixin Han , Xu Guo , Changliang Zou

The knockoff filter is a powerful tool for controlled variable selection with false discovery rate (FDR) control. In this paper, we leverage e-values to allow the nominal FDR level to be switched post-hoc, after looking at the data and…

统计方法学 · 统计学 2026-02-20 Lasse Fischer , Konstantinos Sechidis

We consider problems where many, somewhat redundant, hypotheses are tested and we are interested in reporting the most precise rejections, with false discovery rate (FDR) control. This is the case, for example, when researchers are…

统计方法学 · 统计学 2024-04-23 Paula Gablenz , Chiara Sabatti

Stability and reproducibility are essential considerations in various applications of statistical methods. False Discovery Rate (FDR) control methods are able to control false signals in scientific discoveries. However, many FDR control…

统计方法学 · 统计学 2025-12-22 Jiajun Sun , Zhanrui Cai , Wei Zhong

We consider the problem of assessing the importance of multiple variables or factors from a dataset when side information is available. In principle, using side information can allow the statistician to pay attention to variables with a…

统计方法学 · 统计学 2020-01-23 Zhimei Ren , Emmanuel Candès

We propose one-at-a-time knockoffs (OATK), a new methodology for detecting important explanatory variables in linear regression models while controlling the false discovery rate (FDR). For each explanatory variable, OATK generates a…

统计方法学 · 统计学 2025-02-27 Charlie K. Guan , Zhimei Ren , Daniel W. Apley

One challenge in exploratory association studies using observational data is that the associations between the predictors and the outcome are potentially weak and rare, and the candidate predictors have complex correlation structures. False…

统计方法学 · 统计学 2025-01-30 Runqiu Wang , Ran Dai , Hongying Dai , Evan French , Cheng Zheng

Model-X knockoffs allows analysts to perform feature selection using almost any machine learning algorithm while still provably controlling the expected proportion of false discoveries. To apply model-X knockoffs, one must construct…

统计方法学 · 统计学 2021-06-30 Asher Spector , Lucas Janson

We propose a new method to learn the structure of a Gaussian graphical model with finite sample false discovery rate control. Our method builds on the knockoff framework of Barber and Cand\`{e}s for linear models. We extend their approach…

统计方法学 · 统计学 2021-04-20 Jinzhou Li , Marloes H. Maathuis

We present a novel method for controlling the $k$-familywise error rate ($k$-FWER) in the linear regression setting using the knockoffs framework first introduced by Barber and Cand\`es. Our procedure, which we also refer to as knockoffs,…

统计方法学 · 统计学 2015-11-10 Lucas Janson , Weijie Su

In many multiple testing applications in genetics, the signs of test statistics provide useful directional information, such as whether genes are potentially up- or down-regulated between two experimental conditions. However, most existing…

统计方法学 · 统计学 2025-07-22 Zhaoyang Tian , Kun Liang , Pengfei Li

Controlling the false discovery rate (FDR) is a popular approach to multiple testing, variable selection, and related problems of simultaneous inference. In many contemporary applications, models are not specified by discrete variables,…

统计理论 · 数学 2024-04-16 Mateo Díaz , Venkat Chandrasekaran