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Dimensionality reduction techniques are powerful tools for data preprocessing and visualization which typically come with few guarantees concerning the topological correctness of an embedding. The interleaving distance between the…

机器学习 · 计算机科学 2022-02-01 Bradley J. Nelson , Yuan Luo

We use tools from applied topology for feature selection on time series data. We develop a method for scoring the variables in a multivariate time series that reflects their contributions to the topological features of the corresponding…

代数拓扑 · 数学 2025-08-06 Peter Bubenik , Johnathan Bush

Understanding the structure of high-dimensional data is fundamental to neuroscience and other data-intensive scientific fields. While persistent homology effectively identifies basic topological features such as "holes," it lacks the…

代数拓扑 · 数学 2025-07-16 Ekaterina S. Ivshina , Galit Anikeeva , Ling Zhou

Graphs are powerful abstractions for capturing complex relationships in diverse application settings. An active area of research focuses on theoretical models that define the generative mechanism of a graph. Yet given the complexity and…

社会与信息网络 · 计算机科学 2016-09-19 Rajmonda S. Caceres , Leah Weiner , Matthew C. Schmidt , Benjamin A. Miller , William M. Campbell

Many multi-variate time series obtained in the natural sciences and engineering possess a repetitive behavior, as for instance state-space trajectories of industrial machines in discrete automation. Recovering the times of recurrence from…

计算几何 · 计算机科学 2025-05-20 Simon Schindler , Elias Steffen Reich , Saverio Messineo , Simon Hoher , Stefan Huber

We use methods from computational algebraic topology to study functional brain networks, in which nodes represent brain regions and weighted edges encode the similarity of fMRI time series from each region. With these tools, which allow one…

定量方法 · 定量生物学 2020-08-27 Bernadette J. Stolz , Tegan Emerson , Satu Nahkuri , Mason A. Porter , Heather A. Harrington

Machine learning for point clouds has been attracting much attention, with many applications in various fields, such as shape recognition and material science. For enhancing the accuracy of such machine learning methods, it is often…

机器学习 · 计算机科学 2023-12-29 Naoki Nishikawa , Yuichi Ike , Kenji Yamanishi

The Vietoris-Rips filtration for an $n$-point metric space is a sequence of large simplicial complexes adding a topological structure to the otherwise disconnected space. The persistent homology is a key tool in topological data analysis…

计算几何 · 计算机科学 2017-09-19 Vitaliy Kurlin

While many approaches to make neural networks more fathomable have been proposed, they are restricted to interrogating the network with input data. Measures for characterizing and monitoring structural properties, however, have not been…

Geometry and topology of decision regions are closely related with classification performance and robustness against adversarial attacks. In this paper, we use differential geometry to theoretically explore the geometrical and topological…

机器学习 · 计算机科学 2021-04-19 Bo Liu , Mengya Shen

In today's world of health care, brain tumor detection has become common. However, the manual brain tumor classification approach is time-consuming. So Deep Convolutional Neural Network (DCNN) is used by many researchers in the medical…

图像与视频处理 · 电气工程与系统科学 2024-11-22 Dhananjay Joshi , Bhupesh Kumar Singh , Kapil Kumar Nagwanshi , Nitin S. Choubey

Finding an optimal parameter of a black-box function is important for searching stable material structures and finding optimal neural network structures, and Bayesian optimization algorithms are widely used for the purpose. However, most of…

机器学习 · 计算机科学 2019-02-27 Tatsuya Shiraishi , Tam Le , Hisashi Kashima , Makoto Yamada

One of the paramount challenges in neuroscience is to understand the dynamics of individual neurons and how they give rise to network dynamics when interconnected. Historically, researchers have resorted to graph theory, statistics, and…

神经元与认知 · 定量生物学 2019-02-08 Jean-Baptiste Bardin , Gard Spreemann , Kathryn Hess

Three novel applications of computational topology in the field of fusion science are developed. A procedure for the automatic classification of the orbits of magnetic field lines into topologically distinct classes using Vietoris-Rips…

等离子体物理 · 物理学 2024-10-25 Nicholas Bohlsen

Persistent homology is an effective method for extracting topological information, represented as persistent diagrams, of spatial structure data. Hence it is well-suited for the study of protein structures. Attempts to incorporate…

机器学习 · 计算机科学 2024-08-01 An Wu , Yu Pan , Fuqi Zhou , Jinghui Yan , Chuanlu Liu

Persistent homology analysis provides means to capture the connectivity structure of data sets in various dimensions. On the mathematical level, by defining a metric between the objects that persistence attaches to data sets, we can…

机器学习 · 计算机科学 2019-06-12 Henri Riihimäki , José Licón-Saláiz

We utilize classical facts from topology to show that the classification problem in machine learning is always solvable under very mild conditions. Furthermore, we show that a softmax classification network acts on an input topological…

机器学习 · 计算机科学 2021-06-22 Mustafa Hajij , Kyle Istvan

Topological data analysis combines machine learning with methods from algebraic topology. Persistent homology, a method to characterize topological features occurring in data at multiple scales is of particular interest. A major obstacle to…

代数拓扑 · 数学 2019-04-25 Nello Blaser , Morten Brun

An Important tool in the field topological data analysis is known as persistent Homology (PH) which is used to encode abstract representation of the homology of data at different resolutions in the form of persistence diagram (PD). In this…

图像与视频处理 · 电气工程与系统科学 2022-07-13 Aras Asaad , Dashti Ali , Taban Majeed , Rasber Rashid

With the growing adoption of AI-based systems across everyday life, the need to understand their decision-making mechanisms is correspondingly increasing. The level at which we can trust the statistical inferences made from AI-based…

机器学习 · 统计学 2024-04-15 Adam Spannaus , Heidi A. Hanson , Lynne Penberthy , Georgia Tourassi