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相关论文: Self-oscillatory dynamics of the metabolic process…

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This work continues the study of the earlier constructed mathematical model of the metabolic process running in a cell. We will consider auto-oscillations arising on the level of enzyme-substrate interactions in the nutrient and respiratory…

混沌动力学 · 物理学 2017-07-27 V. I. Grytsay , I. V. Musatenko

Using the classical tools of nonlinear dynamics, we study the process of self-organization and the appearance of the chaos in the metabolic process in a cell with the help of a mathematical model of the transformation of steroids by a cell…

其他定量生物学 · 定量生物学 2018-03-15 V. I. Grytsay , I. V. Musatenko

Aim. To study the dynamics of auto-oscillations arising at the level of enzyme-substrate interaction in a cell and to find the conditions for the self-organization and the formation of chaos in the metabolic process. Methods. A mathematical…

适应与自组织系统 · 物理学 2018-03-15 V. I. Grytsay , I. V. Musatenko

The metabolic process in a cell is modeled with the use of the Fourier transformation. The histograms of the invariant measures of chaotic attractors are constructed. In particular, a scenario of adaptation of the metabolic process under a…

混沌动力学 · 物理学 2017-07-17 V. I Grytsay

We have modeled the metabolic process running in aerobic cells as open nonlinear dissipative systems. The map of metabolic paths and the general scheme of a dissipative system participating in the transformation of steroids are constructed.…

其他定量生物学 · 定量生物学 2020-06-09 V. I. Grytsay , A. G. Medentsev , A. Yu. Arinbasarova

The present work continues studies of the mathematical model of a metabolic process of the Krebs cycle. We study the dependence of its cyclicity on the cell respiration intensity determined by the formation level of carbon dioxide. We…

其他定量生物学 · 定量生物学 2018-04-13 V. I. Grytsay , I. V. Musatenko

Within a mathematical model, the metabolic process of glycolysis is studied. The general scheme of glycolysis is considered as a natural result of the biochemical evolution. By using the theory of dissipative structures, the conditions of…

其他定量生物学 · 定量生物学 2017-07-19 V. I. Grytsay

A mathematical model of the metabolic process of formation of the hemostasis in a blood-carrying vessel is constructed. As distinct from the earlier developed model of the multienzyme prostacyclin-thromboxane system of blood, this model…

组织与器官 · 定量生物学 2017-07-19 V. I. Grytsay

With the help of a mathematical model, the metabolic process of the Krebs cycle is studied. The autocatalytic processes resulting in both the formation of the self-organization in the Krebs cycle and the appearance of a cyclicity of its…

分子网络 · 定量生物学 2017-10-26 V. I. Grytsay , I. V. Musatenko

On the basis of a mathematical model, we continue the study of the metabolic Krebs cycle (or the tricarboxilic acid cycle). For the first time, we consider its consistency and stability, which depend on the dissipation of a transmembrane…

分子网络 · 定量生物学 2016-03-01 V. I. Grytsay

Evidence from experimental studies shows that oscillations due to electro-mechanical coupling can be generated spontaneously in smooth muscle cells. Such cellular dynamics are known as \textit{pacemaker dynamics}. In this article we address…

Within a mathematical model, the process of interaction of the metabolic processes such as glycolysis and gluconeogenesis is studied. As a result of the running of two opposite processes in a cell, the conditions for their interaction and…

其他定量生物学 · 定量生物学 2017-07-19 V. I. Grytsay

We consider the motion of a harmonically trapped overdamped particle, which is submitted to a self-phoretic force, that is proportional to the gradient of a diffusive field for which the particle itself is the source. In agreement with…

统计力学 · 物理学 2025-01-23 A. Alexandre , L. Anderson , T. Collin-Dufresne , T. Guérin , D. S. Dean

The self-oscillatory dynamics is considered as motion of a particle in a potential field in the presence of dissipation. Described mechanism of self-oscillation excitation is not associated with peculiarities of a dissipation function, but…

适应与自组织系统 · 物理学 2018-11-14 Vladimir V. Semenov

We study nonlinear dynamics in a model of three interacting encapsulated gas bubbles in a liquid. The model is a system of three coupled nonlinear oscillators with an external periodic force. Such bubbles have numerous applications, for…

动力系统 · 数学 2024-05-17 Ivan Garashchuk , Alexey Kazakov , Dmitry Sinelshchikov

Spontaneous directed motion, a hallmark of cell biology, is unusual in classical statistical physics. Here we study, using both numerical and analytical methods, organized motion in models of the cytoskeleton in which constituents are…

软凝聚态物质 · 物理学 2012-05-31 Shenshen Wang , Peter G. Wolynes

We study analytically and numerically a model metabolic cycle composed of an arbitrary number of species of catalytically active particles. Each species converts a substrate into a product, the latter being used as the substrate by the next…

软凝聚态物质 · 物理学 2023-09-29 Vincent Ouazan-Reboul , Jaime Agudo-Canalejo , Ramin Golestanian

Sustained rhythmic oscillations, pulsing dynamics, emerge spontaneously when the local connection scheme is randomised in 3-value cellular automata that feature"glider" dynamics. Time-plots of pulsing measures maintain a distinct waveform…

元胞自动机与格子气 · 物理学 2021-03-02 Andrew Wuensche , Edward Coxon

A model of a phase-separating two-component Langmuir monolayer in the presence of a photo-induced reaction interconvering two components is formulated. An interplay between phase separation, orientational ordering and treaction is found to…

斑图形成与孤子 · 物理学 2009-11-10 Ramon Reigada , Alexander S. Mikhailov , Francesc Sagues

We investigate the oscillatory dynamics and bifurcation structure of a reaction-diffusion system with bistable nonlinearity and mass conservation, which was proposed by [Otsuji et al, PLoS Comp. Biol. 3 (2007), e108]. The system is a useful…

细胞行为 · 定量生物学 2025-05-23 Masataka Kuwamura , Hirofumi Izuhara , Shin-ichiro Ei
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