相关论文: The probabilities of trees and cladograms under Fo…
We introduce a probabilistic formalism subsuming Markov random fields of bounded tree width and probabilistic context free grammars. Our models are based on a representation of Boolean formulas that we call case-factor diagrams (CFDs). CFDs…
The hierarchical and recursive expressive capability of rooted trees is applicable to represent statistical models in various areas, such as data compression, image processing, and machine learning. On the other hand, such hierarchical…
Tanglegrams are a special class of graphs appearing in applications concerning cospeciation and coevolution in biology and computer science. They are formed by identifying the leaves of two rooted binary trees. We give an explicit formula…
We introduce some natural families of distributions on rooted binary ranked plane trees with a view toward unifying ideas from various fields, including macroevolution, epidemiology, computational group theory, search algorithms and other…
We study the fundamental question of how likely it is that two randomly chosen trees are isomorphic to each other for different models of random trees. We show that the probability decays exponentially for rooted labeled trees as well as…
Rotation distance between rooted binary trees measures the number of simple operations it takes to transform one tree into another. There are no known polynomial-time algorithms for computing rotation distance. We give an efficient,…
Peca suggested in a recent paper on the arxiv to consider binary butterfly trees and their Horton-Strahler numbers. The trees are obtained by glueing two binary trees together in a special way; the results are again binary trees but with a…
The Kolmogorov axioms for probability functions are placed in the context of signed meadows. A completeness theorem is stated and proven for the resulting equational theory of probability calculus. Elementary definitions of probability…
In this article, we construct a generalization of the Blum-Fran\c{c}ois Beta-splitting model for evolutionary trees, which was itself inspired by Aldous' Beta-splitting model on cladograms. The novelty of our approach allows for asymmetric…
Algorithms for deriving Huffman codes and the recently developed algorithm for compiling PIFO trees to trees of fixed shape (Mohan et al. 2022) are similar, but work with different underlying algebraic operations. In this paper, we exploit…
We identify the complexity of the classification problem for automorphisms of a given countable regularly branching tree up to conjugacy. We consider both the rooted and unrooted cases. Additionally, we calculate the complexity of the…
We endow the space of rooted planar trees with an structure of Hopf algebra. We prove that variations of such a structure lead to Hopf algebras on the spaces of labelled trees, $n$--trees, increasing planar trees and sorted trees. These…
For fixed $t\ge 2$, we consider the class of representations of $1$ as sum of unit fractions whose denominators are powers of $t$ or equivalently the class of canonical compact $t$-ary Huffman codes or equivalently rooted $t$-ary plane…
We study and classify faithfully balanced modules for the algebra of lower triangular $n$ by $n$ matrices. The theory extends known results about tilting modules, which are classified by binary trees, and counted with the Catalan numbers.…
The vector space spanned by rooted forests admits two graded bialgebra structures. The first is defined by A. Connes and D. Kreimer using admissible cuts, and the second is defined by D. Calaque, K. Ebrahimi-Fard and the second author using…
Given any regularly varying dislocation measure, we identify a natural self-similar fragmentation tree as scaling limit of discrete fragmentation trees with unit edge lengths. As an application, we obtain continuum random tree limits of…
The theme of this article is the algebraic combinatorics of leaf-labeled rooted binary trees and forests of such trees. The structure of a Hopf operad is defined on the vector spaces spanned by forests of leaf-labeled, rooted, binary trees.…
These notes are a written version of my talk given at the CARMA workshop in June 2017, with some additional material. I presented a few concepts that have recently been used in the computation of tree-level scattering amplitudes (mostly…
We introduce a monoid structure on a certain set of labelled binary trees, by a process similar to the construction of the plactic monoid. This leads to a new interpretation of the algebra of planar binary trees of Loday-Ronco.
We study the extreme local structure of plane binary trees through the distribution of leaves at maximum depth. We first address two basic questions: (i) the asymptotic probability that exactly two leaves occur at the deepest level, and…