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Restricted solid on solid surface growth models can be mapped onto binary lattice gases. We show that efficient simulation algorithms can be realized on GPUs either by CUDA or by OpenCL programming. We consider a deposition/evaporation…

计算物理 · 物理学 2015-03-17 Henrik Schulz , Géza Ódor , Gergely Ódor , Máté Ferenc Nagy

I present HPRMAT, a high-performance solver library for the linear systems arising in R-matrix coupled-channel scattering calculations in nuclear physics. Designed as a drop-in replacement for the linear algebra routines in existing…

计算物理 · 物理学 2025-12-15 Jin Lei

A high fidelity flow simulation for complex geometries for high Reynolds number ($Re$) flow is still very challenging, which requires more powerful computational capability of HPC system. However, the development of HPC with traditional CPU…

计算物理 · 物理学 2022-03-03 Chuangchao Ye , Pengjunyi Zhang , Rui Yan , Dejun Sun , Zhenhua Wan

In this paper we present a new methodology for data accesses when solving batches of Tridiagonal and Pentadiagonal matrices that all share the same LHS matrix. By only storing one copy of this matrix there is a significant reduction in…

分布式、并行与集群计算 · 计算机科学 2019-09-13 Andrew Gloster , Enda Carroll , Miguel Bustamante , Lennon O'Naraigh

In this paper, we present a GPU-accelerated direct-sum boundary integral method to solve the linear Poisson-Boltzmann (PB) equation. In our method, a well-posed boundary integral formulation is used to ensure the fast convergence of Krylov…

数值分析 · 数学 2015-06-12 Weihua Geng , Ferosh Jacob

Graphics Processing Units (GPUs) with high computational capabilities used as modern parallel platforms to deal with complex computational problems. We use this platform to solve large-scale linear programing problems by revised simplex…

最优化与控制 · 数学 2018-03-14 Arash Raeisi Gahrouei , Mehdi Ghatee

We consider the task of computing solutions of linear systems that only differ by a shift with the identity matrix as well as linear systems with several different right hand sides. In the past Krylov subspace methods have been developed…

高能物理 - 格点 · 物理学 2012-05-03 Sebastian Birk , Andreas Frommer

Many important real-world applications, such as System Identification with Gaussian Processes, involve solving linear systems with symmetric positive-definite matrices. The iterative CG method and direct solvers based on the Cholesky…

分布式、并行与集群计算 · 计算机科学 2026-05-14 Tim Thüring , Alexander Strack , Dirk Pflüger

Since being analyzed by Rokhlin, Szlam, and Tygert and popularized by Halko, Martinsson, and Tropp, randomized Simultaneous Power Iteration has become the method of choice for approximate singular value decomposition. It is more accurate…

数据结构与算法 · 计算机科学 2015-11-02 Cameron Musco , Christopher Musco

Matrices with the displacement structures of circulant, Toeplitz, and Hankel types as well as matrices with structures generalizing these types are omnipresent in computations of sciences and engineering. In this paper, we present efficient…

量子物理 · 物理学 2021-10-06 Lin-Chun Wan , Chao-Hua Yu , Shi-Jie Pan , Su-Juan Qin , Fei Gao , Qiao-Yan Wen

We present a GPU implementation of vertex-patch smoothers for higher order finite element methods in two and three dimensions. Analysis shows that they are not memory bound with respect to GPU DRAM, but with respect to on-chip scratchpad…

数值分析 · 数学 2025-05-07 Cu Cui , Paul Grosse-Bley , Guido Kanschat , Robert Strzodka

We describe a number of recently developed techniques for improving the performance of large-scale nuclear configuration interaction calculations on high performance parallel computers. We show the benefit of using a preconditioned block…

数值分析 · 计算机科学 2017-12-29 Meiyue Shao , Hasan Metin Aktulga , Chao Yang , Esmond G. Ng , Pieter Maris , James P. Vary

The Trotter-Suzuki approximation leads to an efficient algorithm for solving the time-dependent Schr\"odinger equation. Using existing highly optimized CPU and GPU kernels, we developed a distributed version of the algorithm that runs…

计算物理 · 物理学 2013-03-06 Peter Wittek , Fernando M. Cucchietti

Efficiently solving large-scale sparse linear systems poses a significant challenge in computational science, especially in fields such as physics, engineering, machine learning, and finance. Traditional classical algorithms face…

量子物理 · 物理学 2024-10-04 Hakikat Singh

In this work, we design and implement VQ-LLM, an efficient fused Vector Quantization (VQ) kernel generation framework. We first introduce a software abstraction called codebook cache to optimize codebook access efficiency and support the…

分布式、并行与集群计算 · 计算机科学 2025-07-01 Zihan Liu , Xinhao Luo , Junxian Guo , Wentao Ni , Yangjie Zhou , Yue Guan , Cong Guo , Weihao Cui , Yu Feng , Minyi Guo , Yuhao Zhu , Minjia Zhang , Jingwen Leng , Chen Jin

We present a GPU-accelerated version of a high-order discontinuous Galerkin discretization of the unsteady incompressible Navier-Stokes equations. The equations are discretized in time using a semi-implicit scheme with explicit treatment of…

数值分析 · 数学 2018-05-08 Ali Karakus , Noel Chalmers , Kasia Swirydowicz , Timothy Warburton

In this era of diverse and heterogeneous computer architectures, the programmability issues, such as productivity and portable efficiency, are crucial to software development and algorithm design. One way to approach the problem is to step…

数学软件 · 计算机科学 2012-07-10 Mauro Bianco , Ugo Varetto

We revisit the implementation of iterative solvers on discrete graphics processing units and demonstrate the benefit of implementations using extensive kernel fusion for pipelined formulations over conventional implementations of classical…

数学软件 · 计算机科学 2016-11-07 Karl Rupp , Josef Weinbub , Ansgar Jüngel , Tibor Grasser

Multigrid solvers are the standard in modern scientific computing simulations. Domain Decomposition Aggregation-Based Algebraic Multigrid, also known as the DD-$\alpha$AMG solver, is a successful realization of an algebraic multigrid solver…

高能物理 - 格点 · 物理学 2025-08-21 Gustavo Ramirez-Hidalgo , Lianhua He , Ke-Long Zhang

Computational fluid dynamic simulations often produce large clusters of finite elements with non-trivial, non-convex boundaries and uneven distributions among compute nodes, posing challenges to compositing during interactive volume…