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In intracellular transports, motor proteins transport macromolecules as cargos to desired locations by moving on biopolymers such as microtubules. Recent experiments suggest that cargos that can associate motor proteins during their…

生物物理 · 物理学 2023-07-04 Sutapa Mukherji , Dhruvi K. Patel

Intracellular cargo transport can arise from passive diffusion, active motor-driven transport along cytoskeletal filament networks, and passive advection by fluid flows entrained by such motor/cargo motion. Active and advective transport…

生物物理 · 物理学 2012-07-24 P. Khuc Trong , J. Guck , R. E. Goldstein

Motor-driven cargo transport is a complex phenomenon where multiple motor proteins attached on to a cargo engage in pulling activity, often leading to tug-of-war, displaying bidirectional motion. However, most mathematical and computational…

生物物理 · 物理学 2016-09-09 Deepak Bhat , Manoj Gopalakrishnan

We introduce a multi-species lattice gas model for motor protein driven collective cargo transport on cellular filaments. We use this model to describe and analyze the collective motion of interacting vesicle cargoes being carried by…

统计力学 · 物理学 2010-09-10 Sudipto Muhuri , Ignacio Pagonabarraga

Cells are complex structures which require considerable amounts of organization via transport of large intracellular cargo. While passive diffusion is often sufficiently fast for the transport of smaller cargo, active transport is necessary…

生物大分子 · 定量生物学 2018-08-29 Robert Blackwell , David Jung , Mona Bukenberger , Ana-Sunčana Smith

Within cells, vesicles and proteins are actively transported several micrometers along the cytoskeletal filaments. The transport along microtubules is propelled by dynein and kinesin motors, which carry the cargo in opposite directions.…

生物物理 · 物理学 2020-05-20 Robin Jose , Ludger Santen

Intracellular cargos which are transported by molecular motors move stochastically along cytoskeleton filaments. In particular for bidirectionally transported cargos it is an open question whether the characteristics of their motion can…

生物物理 · 物理学 2017-09-20 Sarah Klein , Cecile Appert-Rolland , Ludger Santen

Transport of molecular motors along protein filaments in a half-closed geometry is a common feature of biologically relevant processes in cellular protrusions. Using a lattice gas model we study how the interplay between active and…

生物物理 · 物理学 2017-03-30 Isabella R. Graf , Erwin Frey

Cellular cargo can be bound to cytoskeletal filaments by one or multiple active or passive molecular motors. Recent experiments have shown that the presence of auxiliary, nondriving motors, results in an enhanced processivity of the cargo,…

生物大分子 · 定量生物学 2019-03-27 Filippo Posta , Maria R. D'Orsogna , Tom Chou

Intracellular transport is mediated by molecular motors that pull cargos along cytoskeletal filaments. Many cargos move bidirectionally and are transported by two teams of motors which move into opposite directions along the filament. We…

生物物理 · 物理学 2008-12-16 Melanie J. I. Muller , Stefan Klumpp , Reinhard Lipowsky

Most models designed to study the bidirectional movement of cargos as they are driven by molecular motors rely on the idea that motors of different polarities can be coordinated by external agents if arranged into a motor-cargo complex to…

生物物理 · 物理学 2010-06-29 Carla Goldman

Anomalously slow passive diffusion, $\langle \delta x^2(t)\rangle\simeq t^{\alpha}$, with $0<\alpha<1$, of larger tracers such as messenger RNA and endogenous submicron granules in the cytoplasm of living biological cells has been…

生物物理 · 物理学 2014-09-24 Igor Goychuk , Vasyl O. Kharchenko , Ralf Metzler

The traffic of molecular motors through open tube-like compartments is studied using lattice models. These models exhibit boundary-induced phase transitions related to those of the asymmetric simple exclusion process (ASEP) in one…

统计力学 · 物理学 2007-05-23 Stefan Klumpp , Reinhard Lipowsky

The cargo motion in living cells transported by two species of motor protein with different intrinsic directionality is discussed in this study. Similar to single motor movement, cargo steps forward and backward along microtubule…

生物物理 · 物理学 2015-03-06 Yunxin Zhang

Intracellular transport processes driven by molecular motors can be described by stochastic lattice models of self-driven particles. Here we focus on bidirectional transport models excluding the exchange of particles on the same track. We…

生物物理 · 物理学 2015-05-27 M. Ebbinghaus , C. Appert-Rolland , L. Santen

Many different types of cellular cargos are transported bidirectionally along microtubules by teams of molecular motors. The motion of this cargo-motors system has been experimentally characterized in vivo as processive with rather…

生物物理 · 物理学 2017-09-20 Sarah Klein , Cécile Appert-Rolland , Ludger Santen

The flow of motor proteins on a filamental track is modelled within the the framework of lattice driven diffusive systems. Motors, considered as hopping particles, perform a highly biased asymmetric exclusion process when bound to the…

统计力学 · 物理学 2007-05-23 M. Ebrahim Fouladvand , Modjtaba Salehi , Mostafa Yadegari

As a model for molecular traffic control (MTC) we investigate the diffusion of hard core particles in crossed single-file systems. We consider a square lattice of single-files being connected to external reservoirs. The (vertical)…

统计力学 · 物理学 2009-11-10 A. Brzank , G. M. Schuetz , P. Braeuer , J. Kaerger

Routinely navigating through an ever-changing and unsteady environment, and utilizing chemical energy, molecular motors transport the cell's crucial components, such as neurotransmitters and organelles. They generate force and pull cargo,…

生物物理 · 物理学 2012-09-28 Bartosz Lisowski , Michał Żabicki

Systems under external confinement and constraints often show interesting properties. In this thesis, we study some systems under external confinement. We begin by finding out the probability distribution of end-to-end separation of a Worm…

软凝聚态物质 · 物理学 2007-05-23 Debasish Chaudhuri
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