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We construct an individual-based metapopulation model of population genetics featuring migration, mutation, selection and genetic drift. In the case of a single `island', the model reduces to the Moran model. Using the diffusion…

种群与进化 · 定量生物学 2015-04-16 George W. A. Constable , Alan J. McKane

We investigate the stochastic dynamics of entities which are confined to a set of islands, between which they migrate. They are assumed to be one of two types, and in addition to migration, they also reproduce and die. Systems which fall…

统计力学 · 物理学 2014-04-02 George W. A. Constable , Alan J. McKane

We analyse a model consisting of a population of individuals which is subdivided into a finite set of demes, each of which has a fixed but differing number of individuals. The individuals can reproduce, die and migrate between the demes…

种群与进化 · 定量生物学 2014-08-20 George W A Constable , Alan J McKane

How to maintain relative high diversity is important to avoid premature convergence in population-based optimization methods. Island model is widely considered as a major approach to achieve this because of its flexibility and high…

神经与进化计算 · 计算机科学 2018-01-08 Qinxue Meng , Jia Wu , John Ellisy , Paul J. Kennedy

This article is a presentation of specific recent results describing scaling limits of individual-based models. Thanks to them, we wish to relate the time-scales typical of demographic dynamics and natural selection to the parameters of the…

概率论 · 数学 2023-08-01 Aurélien Velleret

The rapid development of sequencing technologies represents new opportunities for population genetics research. It is expected that genomic data will increase our ability to reconstruct the history of populations. While this increase in…

种群与进化 · 定量生物学 2014-12-04 Olivier Mazet , Willy Rodríguez , Lounès Chikhi

In this paper, we study a finite population undergoing discrete, nonoverlapping generations, that is structured into $D$ demes, each containing $N$ individuals of two possible types, $A$ and $B$, whose viability coefficients, $s_A$ and…

种群与进化 · 定量生物学 2023-11-02 Dhaker Kroumi , Sabin Lessard

An ab-initio numerical study of the density-dependent, evolutionary stable dispersal strategy is presented. The simulations are based on a simple discretei generation island model with four processes: reproduction, dispersal, competition…

种群与进化 · 定量生物学 2013-01-09 Shlomit Weisman , Nadav M. Shnerb , David A. Kessler

The first chapter concerns monotype population models. We first study general birth and death processes and we give non-explosion and extinction criteria, moment computations and a pathwise representation. We then show how different scales…

概率论 · 数学 2017-07-06 Vincent Bansaye , Sylvie Méléard

Near the beginning of the century, Wright and Fisher devised an elegant, mathematically tractable model of gene reproduction and replacement that laid the foundation for contemporary population genetics. The Wright-Fisher model and its…

概率论 · 数学 2013-12-23 Todd L. Parsons

Increasing pressures on the environment are generating an ever-increasing need to manage animal and plant populations sustainably, and to protect and rebuild endangered populations. Effective management requires reliable mathematical…

统计方法学 · 统计学 2009-09-29 Stephen T. Buckland , Ken B. Newman , Carmen Fernández , Len Thomas , John Harwood

Geographic structure can affect patterns of genetic differentiation and speciation rates. In this article, we investigate the dynamics of genetic distances in a geographically structured metapopulation. We model the metapopulation as a…

种群与进化 · 定量生物学 2020-02-25 Verónica Miró Pina , Emmanuel Schertzer

We study a stochastic linear discrete metapolulation model to understand the effect of risk spreading by dispersion. We calculate analytically the stable distribution of populations that live in different habitats. The result shows that the…

种群与进化 · 定量生物学 2015-11-12 Satoru Morita , Jin Yoshimura

Population-based evolutionary algorithms (EAs) have been widely applied to solve various optimization problems. The question of how the performance of a population-based EA depends on the population size arises naturally. The performance of…

神经与进化计算 · 计算机科学 2013-05-13 Jun He , Tianshi Chen , Boris Mitavskiy

A large number of theoretical studies predict that the dynamics of spatially structured populations (metapopulations) can be altered by constant perturbations to local population size. However, these studies presume large metapopulations…

种群与进化 · 定量生物学 2007-05-23 Sutirth Dey , Amitabh Joshi

Ecologists are interested in modeling the population growth of species in various ecosystems. Studying population dynamics can assist environmental managers in making better decisions for the environment. Traditionally, the sampling of…

统计方法学 · 统计学 2021-02-04 Rebecca E. Atanga , Edward L. Boone , Ryad A. Ghanam , Ben Stewart-Koster

A deterministic population dynamics model involving birth and death for a two-species system, comprising a wild-type and more resistant species competing via logistic growth, is subjected to two distinct stress environments designed to…

Spatially resolved genetic data is increasingly used to reconstruct the migrational history of species. To assist such inference, we study, by means of simulations and analytical methods, the dynamics of neutral gene frequencies in a…

种群与进化 · 定量生物学 2008-01-15 Oskar Hallatschek , David R. Nelson

Mechanisms leading to speciation are a major focus in evolutionary biology. In this paper, we present and study a stochastic model of population where individuals, with type a or A, are equivalent from ecological, demographical and spatial…

种群与进化 · 定量生物学 2017-04-20 Camille Coron , Manon Costa , Hélène Leman , Charline Smadi

Traditionally, population models distinguish individuals on the basis of their current state. Given a distribution, a discrete time model then specifies (precisely in deterministic models, probabilistically in stochastic models) the…

种群与进化 · 定量生物学 2023-09-21 B. Boldin , O. Diekmann , J. A. J. Metz
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