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The time-varying effects model is a flexible and powerful tool for modeling the dynamic changes of covariate effects. However, in survival analysis, its computational burden increases quickly as the number of sample sizes or predictors…

统计计算 · 统计学 2020-01-01 Kevin He , Ji Zhu , Jian Kang , Yi Li

Chronic kidney disease (CKD) represents a slowly progressive disorder that can eventually require renal replacement therapy (RRT) including dialysis or renal transplantation. Early identification of patients who will require RRT (as much as…

机器学习 · 计算机科学 2022-09-07 Daniel Lopez-Martinez , Christina Chen , Ming-Jun Chen

Survival analysis is a crucial semi-supervised task in machine learning with numerous real-world applications, particularly in healthcare. Currently, the most common approach to survival analysis is based on Cox's partial likelihood, which…

机器学习 · 计算机科学 2023-04-27 Andre Vauvelle , Benjamin Wild , Aylin Cakiroglu , Roland Eils , Spiros Denaxas

Recent developments in medical imaging with Deep Learning presents evidence of automated diagnosis and prognosis. It can also be a complement to currently available diagnosis methods. Deep Learning can be leveraged for diagnosis, severity…

图像与视频处理 · 电气工程与系统科学 2020-11-04 Aniket Maurya

Background: Chronic kidney disease (CKD), a progressive disease with high morbidity and mortality, has become a significant global public health problem. Most existing models are static and fail to capture temporal trends in disease…

We introduce DeepFHT, a survival-analysis framework that couples deep neural networks with first hitting time (FHT) distributions from stochastic process theory. Time to event is represented as the first passage of a latent diffusion…

机器学习 · 计算机科学 2026-05-13 Alessio Cristofoletto , Cesare Rollo , Giovanni Birolo , Piero Fariselli

Kidney stones are a common and debilitating health issue, and genetic factors play a crucial role in determining susceptibility. While Genome-Wide Association Studies (GWAS) have identified numerous single nucleotide polymorphisms (SNPs)…

基因组学 · 定量生物学 2024-12-24 Amr Salem , Anirban Mondal

This paper introduces feature gradient flow, a new technique for interpreting deep learning models in terms of features that are understandable to humans. The gradient flow of a model locally defines nonlinear coordinates in the input data…

图像与视频处理 · 电气工程与系统科学 2023-07-26 Yinzhu Jin , Jonathan C. Garneau , P. Thomas Fletcher

The characterization of dynamical processes in living systems provides important clues for their mechanistic interpretation and link to biological functions. Thanks to recent advances in microscopy techniques, it is now possible to…

数据分析、统计与概率 · 物理学 2023-11-29 Jesús Pineda , Benjamin Midtvedt , Harshith Bachimanchi , Sergio Noé , Daniel Midtvedt , Giovanni Volpe , Carlo Manzo

Graft-versus-host disease (GVHD) is a rare but often fatal complication in liver transplantation, with a very high mortality rate. By harnessing multi-modal deep learning methods to integrate heterogeneous and imbalanced electronic health…

机器学习 · 计算机科学 2025-11-18 Yushan Jiang , Shuteng Niu , Dongjin Song , Yichen Wang , Jingna Feng , Xinyue Hu , Liu Yang , Cui Tao

The segmentation of kidney layer structures, including cortex, outer stripe, inner stripe, and inner medulla within human kidney whole slide images (WSI) plays an essential role in automated image analysis in renal pathology. However, the…

图像与视频处理 · 电气工程与系统科学 2023-09-07 Muhao Liu , Chenyang Qi , Shunxing Bao , Quan Liu , Ruining Deng , Yu Wang , Shilin Zhao , Haichun Yang , Yuankai Huo

Survival analysis is widely deployed in a diverse set of fields, including healthcare, business, ecology, etc. The Cox Proportional Hazard (CoxPH) model is a semi-parametric model often encountered in the literature. Despite its popularity,…

机器学习 · 计算机科学 2025-05-29 Chengzhi Shi , Stratis Ioannidis

This work presents a novel semi-supervised learning approach for data-driven modeling of asset failures when health status is only partially known in historical data. We combine a generative model parameterized by deep neural networks with…

机器学习 · 计算机科学 2017-09-05 Andre S. Yoon , Taehoon Lee , Yongsub Lim , Deokwoo Jung , Philgyun Kang , Dongwon Kim , Keuntae Park , Yongjin Choi

In this paper, we explore a method for treating survival analysis as a classification problem. The method uses a "stacking" idea that collects the features and outcomes of the survival data in a large data frame, and then treats it as a…

统计方法学 · 统计学 2019-09-27 Chenyang Zhong , Robert Tibshirani

This paper presents the first deep reinforcement learning (DRL) framework to estimate the optimal Dynamic Treatment Regimes from observational medical data. This framework is more flexible and adaptive for high dimensional action and state…

人工智能 · 计算机科学 2018-01-30 Ning Liu , Ying Liu , Brent Logan , Zhiyuan Xu , Jian Tang , Yanzhi Wang

Traditional survival models such as the Cox proportional hazards model are typically based on scalar or categorical clinical features. With the advent of increasingly large image datasets, it has become feasible to incorporate quantitative…

计算机视觉与模式识别 · 计算机科学 2020-01-09 Christoph Haarburger , Philippe Weitz , Oliver Rippel , Dorit Merhof

Recently developed survival analysis methods improve upon existing approaches by predicting the probability of event occurrence in each of a number pre-specified (discrete) time intervals. By avoiding placing strong parametric assumptions…

机器学习 · 统计学 2023-10-25 Jimmy Hickey , Ricardo Henao , Daniel Wojdyla , Michael Pencina , Matthew M. Engelhard

This paper explores foundational and applied aspects of survival analysis, using fall risk assessment as a case study. It revisits key time-related probability distributions and statistical methods, including logistic regression, Poisson…

机器学习 · 计算机科学 2025-01-07 Tianhua Chen

As the global population ages, the incidence of Chronic Kidney Disease (CKD) is rising. CKD often remains asymptomatic until advanced stages, which significantly burdens both the healthcare system and patient quality of life. This research…

人工智能 · 计算机科学 2024-04-18 Nantika Nguycharoen

Utilizing clinical texts in survival analysis is difficult because they are largely unstructured. Current automatic extraction models fail to capture textual information comprehensively since their labels are limited in scope. Furthermore,…

计算与语言 · 计算机科学 2021-05-04 Hyun Gi Lee , Evan Sholle , Ashley Beecy , Subhi Al'Aref , Yifan Peng