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Protein compartmentalization in the frame of a liquid-liquid phase separation is a key mechanism to optimize spatiotemporal control of biological systems. Such a compartmentalization process reduces the intrinsic noise in protein…

The human brain is organized in functional modules. Such an organization presents a basic conundrum: modules ought to be sufficiently independent to guarantee functional specialization and sufficiently connected to bind multiple processors…

生物物理 · 物理学 2015-05-27 Lazaros K. Gallos , Hernan A. Makse , Mariano Sigman

Large-scale white matter pathways crisscrossing the cortex create a complex pattern of connectivity that underlies human cognitive function. Generative mechanisms for this architecture have been difficult to identify in part because little…

神经元与认知 · 定量生物学 2015-06-16 Florian Klimm , Danielle S. Bassett , Jean M. Carlson , Peter J. Mucha

This article proposes a novel Bayesian classification framework for networks with labeled nodes. While literature on statistical modeling of network data typically involves analysis of a single network, the recent emergence of complex data…

统计方法学 · 统计学 2020-09-25 Sharmistha Guha , Abel Rodriguez

We study the Ising model in a hierarchical small-world network by renormalization group analysis, and find a phase transition between an ordered phase and a critical phase, which is driven by the coupling strength of the shortcut edges.…

统计力学 · 物理学 2012-09-25 Tomoaki Nogawa , Takehisa Hasegawa , Koji Nemoto

Human brain dynamics can be profitably viewed through the lens of statistical mechanics, where neurophysiological activity evolves around and between local attractors representing preferred mental states. Many physically-inspired models of…

神经元与认知 · 定量生物学 2016-09-06 Arian Ashourvan , Shi Gu , Marcelo G. Mattar , Jean M. Vettel , Danielle S. Bassett

We investigate the emergence of synchronization in a network of coupled chaotic macroeconomic systems. Each node represents an economy characterized by three key variables savings, gross domestic product (GDP), and foreign capital inflows.…

适应与自组织系统 · 物理学 2026-05-26 Thierry Njougouo , Fernando Fagundes Ferreira , Diego Garlaschelli

Brain networks has attracted the interests of many neuroscientists. From functional MRI (fMRI) data, statistical tools have been developed to recover brain networks. However, the dimensionality of whole-brain fMRI, usually in hundreds of…

统计方法学 · 统计学 2014-04-08 Xi Luo

A main goal in the analysis of a complex system is to infer its underlying network structure from time-series observations of its behaviour. The inference process is often done by using bi-variate similarity measures, such as the…

无序系统与神经网络 · 物理学 2019-09-06 Rodrigo A. García , Arturo C. Martí , Cecilia Cabeza , Nicolás Rubido

Complex spatiotemporal patterns, called chimera states, consist of coexisting coherent and incoherent domains and can be observed in networks of coupled oscillators. The interplay of synchrony and asynchrony in complex brain networks is an…

适应与自组织系统 · 物理学 2019-06-20 Teresa Chouzouris , Iryna Omelchenko , Anna Zakharova , Jaroslav Hlinka , Premysl Jiruska , Eckehard Schöll

We study the dynamics of the processes in the small-world networks with a power-law degree distribution where every node is considered to be in one of the two available statuses. We present an algorithm for generation of such network and…

统计力学 · 物理学 2019-07-19 Bahruz Gadjiev , Tatiana Progulova

The ability to store continuous variables in the state of a biological system (e.g. a neural network) is critical for many behaviours. Most models for implementing such a memory manifold require hand-crafted symmetries in the interactions…

神经元与认知 · 定量生物学 2024-09-09 Tankut Can , Kamesh Krishnamurthy

We study the connection between the highly non-convex loss function of a simple model of the fully-connected feed-forward neural network and the Hamiltonian of the spherical spin-glass model under the assumptions of: i) variable…

机器学习 · 计算机科学 2015-01-23 Anna Choromanska , Mikael Henaff , Michael Mathieu , Gérard Ben Arous , Yann LeCun

Hierarchical Bayesian models of perception and learning feature prominently in contemporary cognitive neuroscience where, for example, they inform computational concepts of mental disorders. This includes predictive coding and hierarchical…

Neural computation is associated with the emergence, reconfiguration and dissolution of cell assemblies in the context of varying oscillatory states. Here, we describe the complex spatio-temporal dynamics of cell assemblies through temporal…

神经元与认知 · 定量生物学 2020-01-20 Nicola Pedreschi , Christophe Bernard , Wesley Clawson , Pascale Quilichini , Alain Barrat , Demian Battaglia

In the past decade, synchronization on complex networks has attracted increasing attentions from various research disciplines. Most previous works, however, focus only on the dynamic behaviors of synchronization process in the stable…

数据分析、统计与概率 · 物理学 2011-10-26 Zhao Zhuo , Shimin Cai , Jie Zhang , Zhongqian Fu

Memory networks are neural networks with an explicit memory component that can be both read and written to by the network. The memory is often addressed in a soft way using a softmax function, making end-to-end training with backpropagation…

机器学习 · 统计学 2016-05-25 Sarath Chandar , Sungjin Ahn , Hugo Larochelle , Pascal Vincent , Gerald Tesauro , Yoshua Bengio

A two-dimensional small-world type network, subject to spatial prisoners' dilemma dynamics and containing an influential node defined as a special node with a finite density of directed random links to the other nodes in the network, is…

无序系统与神经网络 · 物理学 2009-11-07 Beom Jun Kim , Ala Trusina , Petter Holme , Petter Minnhagen , Jean S. Chung , M. Y. Choi

Modular networks, such as critical infrastructures, are often built from distinct, densely connected modules (e.g., cities) that are sparsely interconnected. When such networks are gradually and randomly disrupted under a percolation…

物理与社会 · 物理学 2026-02-12 Yael Kfir-Cohen , Dana Ben Porath , Bnaya Gross , Sergey Buldyrev , Shlomo Havlin

The Susceptible-Infected-Susceptible (SIS) model is one of the simplest memoryless system for describing information/epidemic spreading phenomena with competing creation and spontaneous annihilation reactions. The effect of quenched…

物理与社会 · 物理学 2013-09-10 Géza Ódor