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Catalytically active enzymes have recently been observed to exhibit enhanced diffusion. In a recent work [C. Riedel et al., Nature 517, 227 (2015)], it has been suggested that this phenomenon is correlated with the degree of exothermicity…

生物物理 · 物理学 2016-08-29 Ramin Golestanian

Enzymes have been recently found to exhibit enhanced diffusion due to their catalytic activities. A recent experiment [C. Riedel et al., Nature 517, 227 (2015)] has found evidence that suggests this phenomenon might be controlled by the…

生物大分子 · 定量生物学 2015-09-30 Ramin Golestanian

Recent experiments have revealed that the diffusivity of exothermic and fast enzymes is enhanced when they are catalytically active, and different physical mechanisms have been explored and quantified to account for this observation. We…

生物物理 · 物理学 2017-08-02 Pierre Illien , Xi Zhao , Krishna K. Dey , Peter J. Butler , Ayusman Sen , Ramin Golestanian

Many experiments in recent years have reported that, when exposed to their corresponding substrate, catalytic enzymes undergo enhanced diffusion as well as chemotaxis (biased motion in the direction of a substrate gradient). Among other…

软凝聚态物质 · 物理学 2020-11-17 Jaime Agudo-Canalejo , Ramin Golestanian

The concept that catalytic enzymes can act as molecular machines transducing chemical activity into motion has conceptual and experimental support, but much of the claimed support comes from experimental conditions where the substrate…

软凝聚态物质 · 物理学 2020-02-04 Ah-Young Jee , Kuo Chen , Tsvi Tlusty , Jiang Zhao , Steve Granick

Many enzymes appear to diffuse faster in the presence of substrate and to drift either up or down a concentration gradient of their substrate. Observations of these phenomena, termed enhanced enzyme diffusion (EED) and enzyme chemotaxis,…

化学物理 · 物理学 2019-10-29 Mudong Feng , Michael K. Gilson

Theoretical analysis, which maps single molecule time trajectories of a molecular motor onto unicyclic Markov processes, allows us to evaluate the heat dissipated from the motor and to elucidate its dependence on the mean velocity and…

亚细胞过程 · 定量生物学 2017-04-05 Wonseok Hwang , Changbong Hyeon

Enhanced diffusion and anti-chemotaxis of enzymes have been reported in several experiments in the last decade, opening up entirely new avenues of research in the bio-nanosciences both at the applied and fundamental level. Here, we…

统计力学 · 物理学 2020-07-29 Daniel Maria Busiello , Paolo De Los Rios , Francesco Piazza

Enzymes have been recently proposed to have mechanical activity associated with their chemical activity. In a number of recent studies, it has been reported that enzymes undergo enhanced diffusion in the presence of their corresponding…

生物物理 · 物理学 2021-04-07 Jaime Agudo-Canalejo , Tunrayo Adeleke-Larodo , Pierre Illien , Ramin Golestanian

Molecular agitation more rapid than thermal Brownian motion is reported for cellular environments, motor proteins, synthetic molecular motors, enzymes, and common chemical reactions, yet that chemical activity couples to molecular motion…

软凝聚态物质 · 物理学 2022-06-08 Ah-Young Jee , Tsvi Tlusty , Steve Granick

We investigated the energy transfer from active enzymes to their surroundings in crowded environments by measuring the diffusion of passive microscopic tracers in active solutions of ficoll and glycerol. Despite observing lower rates of…

Situations where a spontaneous process of energy or matter transfer is enhanced by an external device are widespread in nature (human sweating system, enzyme catalysis, facilitated diffusion across bio-membranes, industrial heat…

统计力学 · 物理学 2010-07-21 Karen Hovhannisyan , Armen E. Allahverdyan

Several different enzymes display an apparent diffusion coefficient that increases with the concentration of their substrate. Moreover, their motion becomes directed in substrate gradients. Currently, there are several competing models for…

生物物理 · 物理学 2020-09-23 Giovanni Giunta , Hamid Seyed-Allaei , Ulrich Gerland

Self-propulsion of particles is typically explained by phoretic mechanisms driven by externally imposed chemical, electric, or thermal gradients. In contrast, chemical reactions can enhance particle diffusion even in the absence of such…

软凝聚态物质 · 物理学 2025-10-08 A. Arango-Restrepo , J. M. Rubi

Enzymes show two distinct transport behaviors in the presence of their substrates in solution. First, their diffusivity enhances with increasing substrate concentration. In addition, enzymes perform directional motion toward regions with…

生物物理 · 物理学 2018-11-06 Farzad Mohajerani , Xi Zhao , Ambika Somasundar , Darrell Velegol , Ayusman Sen

Recent experiments claimed that the enhancement of catalytic reaction rates occurs via the reduction of activation barriers driven by non-equilibrium (``hot'') electrons in plasmonic metal nanoparticles. These experiments place plasmonic…

化学物理 · 物理学 2020-04-22 Yonatan Sivan , Ieng Wai Un , Yonatan Dubi

Chemotaxis of enzymes in response to gradients in the concentration of their substrate has been widely reported in recent experiments, but a basic understanding of the process is still lacking. Here, we develop a microscopic theory for…

生物物理 · 物理学 2021-04-07 Jaime Agudo-Canalejo , Pierre Illien , Ramin Golestanian

A range of chemical reactions occurring on the surfaces of metal nanoparticles exhibit enhanced rates under plasmonic excitation. Recent analyses based on Arrhenius law fitting have argued in favor of a purely photothermal mechanism of…

化学物理 · 物理学 2020-06-11 Prashant K. Jain

Based on the generalized non-Markovian equations obtained earlier for a nonequilibrium one-particle distribution function and potential part of the averaged enthalpy density [Markiv B.B., Omelyan I.P, Tokarchuk M.V., Condens. Matter Phys.,…

统计力学 · 物理学 2012-04-30 B. B. Markiv , I. P. Omelyan , M. V. Tokarchuk

The prevalent scheme of a diffusion-mediated bimolecular reaction $A+B\rightarrow P$ is an adaptation of that proposed by Briggs and Haldane for enzyme action [{\em Biochem J.\/}, 19:338--339, 1925]. The purpose of this Note is to explain,…

化学物理 · 物理学 2014-11-11 K. Razi Naqvi
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