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Biological information processing is often carried out by complex networks of interconnected dynamical units. A basic question about such networks is that of reliability: if the same signal is presented many times with the network in…

混沌动力学 · 物理学 2015-06-11 Guillaume Lajoie , Kevin K. Lin , Eric Shea-Brown

We investigate species-rich mathematical models of ecosystems. While much of the existing literature focuses on the properties of equilibrium fixed points, persistent dynamics (e.g., limit cycles or chaos) have also been observed, both in…

适应与自组织系统 · 物理学 2025-09-10 Robin Delabays , Philippe Jacquod

Evolutionary game theory has traditionally employed deterministic models to describe population dynamics. These models, due to their inherent nonlinearities, can exhibit deterministic chaos, where population fluctuations follow complex,…

种群与进化 · 定量生物学 2025-04-02 Maria Alejandra Ramirez , George Datseris , Arne Traulsen

Species do not merely evolve, they also coevolve with other organisms. Coevolution is a major force driving interacting species to continuously evolve ex- ploring their fitness landscapes. Coevolution involves the coupling of species fit-…

适应与自组织系统 · 物理学 2013-03-25 Ricard V. Sole , Josep Sardanyes

Structure, composition and stability of ecological populations are shaped by the inter- and intra-species interactions within these communities. It remains to be fully understood how the interplay of these interactions with other factors,…

种群与进化 · 定量生物学 2023-01-16 Nava Leibovich , Jeremy Rothschild , Sidhartha Goyal , Anton Zilman

The maintenance of diversity, the `commonness of rarity', and compositional turnover are ubiquitous features of species-rich communities. Through a minimal model, we consider how these features reflect the interplay between environmental…

种群与进化 · 定量生物学 2025-12-04 Emil Mallmin , Arne Traulsen , Silvia De Monte

We study the evolution of the dynamics across a generic first order quantum phase transition in an interacting boson model of nuclei. The dynamics inside the phase coexistence region exhibits a very simple pattern. A classical analysis…

核理论 · 物理学 2015-03-13 A. Leviatan , M. Macek

Many theoretical models have been formulated to better understand the coevolutionary patterns that emerge from antagonistic interactions. These models usually assume that the attacks by the exploiters are random, so the effect of victim…

Empirical observations in marine ecosystems have suggested a balance of biological and advection time scales as a possible explanation of species coexistence. To characterise this scenario, we measure the time to fixation in neutrally…

种群与进化 · 定量生物学 2018-04-09 Tobias Galla , Vicente Pérez-Muñuzuri

The dynamics of two competing species in a finite size community is one of the most studied problems in population genetics and community ecology. Stochastic fluctuations lead, inevitably, to the extinction of one of the species, but the…

种群与进化 · 定量生物学 2016-11-30 Matan Danino , David A. Kessler , Nadav M. Shnerb

Oscillatory dynamics are ubiquitous in biological networks. Possible sources of oscillations are well understood in low-dimensional systems, but have not been fully explored in high-dimensional networks. Here we study large networks…

无序系统与神经网络 · 物理学 2016-12-21 Célian Bimbard , Erwan Ledoux , Srdjan Ostojic

The sensitivity of a wave field's evolution to small perturbations is of fundamental interest. For chaotic systems, there are two distinct regimes of either exponential or Gaussian overlap decay in time. We develop a semiclassical approach…

混沌动力学 · 物理学 2009-11-07 Nicholas R. Cerruti , Steven Tomsovic

We study the evolution of the network properties of a populated network embedded in a genotype space characterised by either a low or a high number of potential links, with particular emphasis on the connectivity and clustering. Evolution…

统计力学 · 物理学 2007-05-23 Paul Anderson , Henrik Jeldtoft Jensen

The dynamics on a chaotic attractor can be quite heterogeneous, being much more unstable in some regions than others. Some regions of a chaotic attractor can be expanding in more dimensions than other regions. Imagine a situation where two…

混沌动力学 · 物理学 2018-11-14 Yoshitaka Saiki , Miguel A. F. Sanjuan , James A. Yorke

The behavior of interacting populations typically displays irregular temporal and spatial patterns that are difficult to reconcile with an underlying deterministic dynamics. A classical example is the heterogeneous distribution of plankton…

种群与进化 · 定量生物学 2009-11-13 M. H. Vainstein , J. M. Rubi , J. M. G. Vilar

Random walks serve as important tools for studying complex network structures, yet their dynamics in cases where transition probabilities are not static remain under explored and poorly understood. Here we study nonlinear random walks that…

混沌动力学 · 物理学 2022-06-14 Digesh Chitrakar , Per Sebastian Skardal

What determines biodiversity in nature is a prominent issue in ecology, especially in biotic resource systems that are typically devoid of cross-feeding. Here, we show that by incorporating pairwise encounters among consumer individuals…

种群与进化 · 定量生物学 2025-06-18 Ju Kang , Shijie Zhang , Yiyuan Niu , Xin Wang

Low-dimensional yet rich dynamics often emerge in the brain. Examples include oscillations and chaotic dynamics during sleep, epilepsy, and voluntary movement. However, a general mechanism for the emergence of low dimensional dynamics…

神经元与认知 · 定量生物学 2018-08-29 Wilten Nicola , Peter Hellyer , Sue Ann Campbell , Claudia Clopath

In the context of multistability driven diseases, like cancer, spatiotemporal plasticity plays a significant role to achieve a spectrum of phenotypic variations. The interplay between gene regulatory networks and environmental factors, such…

种群与进化 · 定量生物学 2026-02-17 Ranu Kundu , Priya Chakraborty , Sohini Guin , Shyam Sundar Poriah , Sayantari Ghosh

Chaotic dynamics can be quite heterogeneous in the sense that in some regions the dynamics are unstable in more directions than in other regions. When trajectories wander between these regions, the dynamics is complicated. We say a chaotic…

动力系统 · 数学 2022-10-10 Yoshitaka Saiki , Hiroki Takahasi , James A. Yorke