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With respect to biological findings underlying fly's physiology in the past decade, we present a directionally selective neural network, with a feed-forward structure and entirely low-level visual processing, so as to implement direction…

神经与进化计算 · 计算机科学 2018-08-24 Qinbing Fu , Nicola Bellotto , Shigang Yue

Collective motion of cells is critical to some of the most vital tasks including wound healing, development, and immune response [Friedl and Gilmour 2009; Tokarski et al. 2012; Lee et al. 2012; Beltman et al. 2009], and is common to many…

细胞行为 · 定量生物学 2014-07-04 Mircea Davidescu , Iain Couzin

Despite their impressive performance on computer vision benchmarks, Deep Neural Networks (DNNs) still fall short of adequately modeling human visual behavior, as measured by error consistency and shape bias. Recent work hypothesized that…

计算机视觉与模式识别 · 计算机科学 2026-02-17 Max Wolff , Thomas Klein , Evgenia Rusak , Felix Wichmann , Wieland Brendel

In this brief paper, a learning algorithm is developed for Deep Learning Neuro-Skin Neural Network to improve their learning properties. Neuroskin is a new type of neural network presented recently by the authors. It is comprised of a…

神经与进化计算 · 计算机科学 2020-07-10 Mehrdad Shafiei Dizaji

The brain encodes spacial structure through a combinatorial code of neural activity. Experiments suggest such codes correspond to convex areas of the subject's environment. We present an intrinsic condition that implies a neural code may…

组合数学 · 数学 2016-10-20 Robert Williams

We introduce a graphical method originating from the computer graphics domain that is used for the arbitrary and intuitive placement of cells over a two-dimensional manifold. Using a bitmap image as input, where the color indicates the…

神经与进化计算 · 计算机科学 2018-03-23 Nicolas P. Rougier

Hair bundles are biological oscillators that actively transduce mechanical stimuli into electrical signals in the auditory, vestibular, and lateral-line systems of vertebrates. A bundle's function can be explained in part by its operation…

生物物理 · 物理学 2016-08-29 Joshua D. Salvi , Dáibhid Ó Maoiléidigh , A. J. Hudspeth

We consider the problem of predicting an individual's identity from accelerometry data collected during walking. In a previous paper we introduced an approach that transforms the accelerometry time series into an image by constructing its…

应用统计 · 统计学 2024-10-16 Lily Koffman , Ciprian Crainiceanu , Andrew Leroux

Biological and artificial neural systems form high-dimensional neural representations that underpin their computational capabilities. Methods for quantifying geometric similarity in neural representations have become a popular tool for…

神经元与认知 · 定量生物学 2024-12-20 Amin Nejatbakhsh , Victor Geadah , Alex H. Williams , David Lipshutz

Kinetic Particle In Cell (PIC) methods can extend greatly their range of applicability if implicit time differencing and spatial adaption are used to address the wide range of time and length scales typical of plasmas. For implicit…

等离子体物理 · 物理学 2008-06-05 Giovanni Lapenta

Stochastic Gradient Descent (SGD) has proven to be remarkably effective in optimizing deep neural networks that employ ever-larger numbers of parameters. Yet, improving the efficiency of large-scale optimization remains a vital and highly…

机器学习 · 计算机科学 2020-11-11 Frithjof Gressmann , Zach Eaton-Rosen , Carlo Luschi

Certain species of living creatures are known to orientate themselves in the geomagnetic field. Given the small magnitude of approximately 48 {\mu}T, the underlying quantum mechanical phenomena are expected to exhibit coherence times…

This paper proposes an iterative algorithm for choosing gradient directions use to reconstruct white matter fibers in the brain. The present study is not focusing on data acquisition where scanning is performed. The Adaptive Gradient…

生物大分子 · 定量生物学 2021-10-05 Ashishi Puri , Sanjeev Kumar

Eukaryotic cells sense chemical gradients to decide where and when to move. Clusters of cells can sense gradients more accurately than individual cells by integrating measurements of the concentration made across the cluster. Is this…

细胞行为 · 定量生物学 2021-10-22 Emiliano Perez Ipiña , Brian A. Camley

Advanced radio-frequency pulse design used in magnetic resonance imaging has recently been demonstrated with deep learning of (convolutional) neural networks and reinforcement learning. For two-dimensionally selective radio-frequency…

医学物理 · 物理学 2022-01-24 Mads Sloth Vinding , Torben Ellegaard Lund

Image-based sequencing of mRNA makes it possible to see where in a tissue sample a given gene is active, and thus discern large numbers of different cell types in parallel. This is crucial for gaining a better understanding of tissue…

定量方法 · 定量生物学 2018-02-27 Gabriele Partel , Giorgia Milli , Carolina Wählby

In this work we study the detection of weak stimuli by spiking neurons in the presence of certain level of noisy background neural activity. Our study has focused in the realistic assumption that the synapses in the network present…

神经元与认知 · 定量生物学 2009-06-04 Jorge F. Mejias , Joaquin J. Torres

Expansion of the neocortex is a hallmark of human evolution. However, it remains an open question what adaptive mechanisms facilitated its expansion. Here we show, using gyrencephaly index (GI) and other physiological and life-history data…

种群与进化 · 定量生物学 2015-08-26 Eric Lewitus , Iva Kelava , Alex T. Kalinka , Pavel Tomancak , Wieland B Huttner

Graph Neural Networks (GNNs) have shown remarkable success in learning from graph-structured data. However, their application to directed graphs (digraphs) presents unique challenges, primarily due to the inherent asymmetry in node…

机器学习 · 计算机科学 2025-05-16 Wei Zhuo , Han Yu , Guang Tan , Xiaoxiao Li

This research is motivated by the need for effective classification in ice-breaking dynamic simulations, aimed at determining the conditions under which an underwater vehicle will break through the ice. This simulation is extremely…

统计方法学 · 统计学 2025-06-05 Tian Bai , Dianpeng Wang , Kuangqi Chen , Xu He