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The constraints imposed by nano- and microscale confinement on the conformational degrees of freedom of thermally fluctuating biopolymers are utilized in contemporary nano-devices to specifically elongate and manipulate single chains. A…

软凝聚态物质 · 物理学 2010-09-14 F. Thüroff , F. Wagner , E. Frey

The statistical theory of polymers tethered around the inner surface of a cylindrical channel has traditionally employed the assumption that the equilibrium density of the polymers is independent of the azimuthal coordinate. However,…

软凝聚态物质 · 物理学 2015-01-30 D. Osmanovic , M. Kerr-Winter , R. C. Eccleston , B. W. Hoogenboom , I. J. Ford

How the geometry of nano-sized confinement affects dynamics of biomaterials is interesting yet poorly understood. An elucidation of structural details upon nano-sized confinement may benefit manufacturing pharmaceuticals in biomaterial…

生物物理 · 物理学 2015-05-13 Shao-Qing Zhang , Margaret S. Cheung

Trapping macromolecules in nanopits finds multifarious applications in polymer separation, filtering biomolecules etc. However, tuning the locomotion of polymers in channels of nanoscopic dimensions is greatly restricted by the comparative…

流体动力学 · 物理学 2016-05-10 Sree Hari P D , Chirodeep Bakli , Suman Chakraborty

Monte Carlo simulations are used to study the behavior of two polymers under confinement in a cylindrical tube. Each polymer is modeled as a chain of hard spheres. We measure the free energy of the system, F, as a function of the distance…

软凝聚态物质 · 物理学 2015-06-22 James M. Polson , Logan G. Montgomery

We examine pressure-driven non-equilibrium transport of linear, circular and star polymers through a nanochannel containing a rectangular pit with full hydrodynamic interactions and thermal fluctuations. We demonstrate that with…

软凝聚态物质 · 物理学 2015-06-18 Santtu T. T. Ollila , Colin Denniston , Mikko Karttunen , Tapio Ala-Nissila

Entropy-driven directed translocation of a flexible polymer through a cone-shaped channel is studied theoretically and using computer simulation. For a given length of the channel, the effective force of entropic origin acting on the…

软凝聚态物质 · 物理学 2015-06-12 Narges Nikoofard , Hamidreza Khalilian , Hossein Fazli

Confinement is a versatile and well-established tool to study the properties of polymers either to understand biological processes or to develop new nano-biomaterials. We investigate the conformations of a semiflexible polymer ring in weak…

软凝聚态物质 · 物理学 2010-06-25 Katja Ostermeir , Karen Alim , Erwin Frey

We consider the problem of an ideal polymer confined in a droplet. When the droplet radius is smaller than the (unconfined) polymer radius of gyration, the polymer entropy will depend on the droplet shape. We compute the resulting surface…

凝聚态物理 · 物理学 2009-10-28 M. Goulian , S. T. Milner

The non-equilibrium structural and dynamical properties of flexible polymers confined in a square microchannel and exposed to a Poiseuille flow are investigated by mesoscale simulations. The chain length and the flow strength are…

软凝聚态物质 · 物理学 2009-11-13 L. Cannavacciuolo , R. G. Winkler , G. Gompper

The physics of diffusion phenomena in nano and micro channels has attracted a lot of attention in recent years, due to its close connection with many technological, medical and industrial applications. In the present paper we employ a…

软凝聚态物质 · 物理学 2015-09-30 Umberto Marini Bettolo Marconi , Paolo Malgaretti , Ignacio Pagonabarraga

Over the past two decades polymer nanocomposites have received tremendous interest from industry and academia due to their advanced properties comparative to polymer blends. Many computational studies have revealed that the macroscopic…

材料科学 · 物理学 2015-04-07 Argyrios Karatrantos

The tube model is a central concept in polymer physics, and allows to reduce the complex many-filament problem of an entangled polymer solution to a single filament description. We investigate the probability distribution function of…

软凝聚态物质 · 物理学 2009-08-12 Hauke Hinsch , Erwin Frey

The advances in new technologies have prompted the need for functional systems smaller than the gyration radius of polymer chains. Thus, understanding how nanoconfinement affects polymer properties has been the focus of a lot of research…

软凝聚态物质 · 物理学 2010-07-27 Fabrice Cousin , Jérémie Gummel , Daniel Clemens , Isabelle Grillo , François Boué

We revisit the classical problem of the behavior of an isolated linear polymer chain in confined spaces, introducing the distinction between two different confinement regimes (the {\it weak} and the {\it strong} confinement regimes,…

软凝聚态物质 · 物理学 2009-11-11 Takahiro Sakaue , Elie Raphael

We consider an inextensible, semiflexible polymer or worm-like chain, with persistence length $P$ and contour length $L$, fluctuating in a cylindrical channel of diameter $D$. In the regime $D\ll P\ll L$, corresponding to a long, tightly…

软凝聚态物质 · 物理学 2015-05-19 Theodore W. Burkhardt , Yingzi Yang , Gerhard Gompper

We report simulation results on melts of entangled linear polymers confined in a free-standing thin film. We study how the geometric constraints imposed by the confinement alter the entanglement state of the system compared to the…

软凝聚态物质 · 物理学 2019-03-06 Nicolás A. García , Jean-Louis Barrat

Macromolecular crowding can influence polymer shapes, which is important for understanding the thermodynamic stability of polymer solutions and the structure and function of biopolymers (proteins, RNA, DNA) under confinement. We explore the…

软凝聚态物质 · 物理学 2014-10-27 Wei Kang Lim , Alan R. Denton

We study the thermodynamic properties of a semiflexible polymer confined inside strips of widths L<=9 defined on a square lattice. The polymer is modeled as a self-avoiding walk and a short range interaction between the monomers and the…

统计力学 · 物理学 2007-05-23 Jurgen F. Stilck

We use Brownian dynamics simulations and advanced topological profiling methods to characterize the out-of-equilibrium evolution of self-entanglement in linear polymers confined into nano-channels and under periodic compression. We…

软凝聚态物质 · 物理学 2020-06-22 Davide Michieletto , Enzo Orlandini , Matthew S Turner , Cristian Micheletti