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We study the fundamental question of how efficiently suffix array entries can be accessed when the array cannot be stored explicitly. The suffix array $SA_T[1..n]$ of a text $T$ of length $n$ encodes the lexicographic order of its suffixes…

数据结构与算法 · 计算机科学 2025-10-23 Dominik Kempa , Tomasz Kociumaka

Suppose that we are given a string $s$ of length $n$ over an alphabet $\{0,1,\ldots,n^{O(1)}\}$ and $\delta$ is the string complexity of $s$, a known compression measure. We describe an index on $s$ with $O(\delta\log\frac{n}{\delta})$…

数据结构与算法 · 计算机科学 2026-04-15 Dmitry Kosolobov

Given a string of length $n$ that is composed of $r$ runs of letters from the alphabet $\{0,1,\ldots,\sigma{-}1\}$ such that $2 \le \sigma \le r$, we describe a data structure that, provided $r \le n / \log^{\omega(1)} n$, stores the string…

数据结构与算法 · 计算机科学 2018-02-27 José Fuentes-Sepúlveda , Juha Kärkkäinen , Dmitry Kosolobov , Simon J. Puglisi

We consider the problem of encoding a string of length $n$ from an integer alphabet of size $\sigma$ so that access and substring equality queries (that is, determining the equality of any two substrings) can be answered efficiently. Any…

数据结构与算法 · 计算机科学 2020-05-12 Nicola Prezza

Two recent lower bounds on the compressibility of repetitive sequences, $\delta \le \gamma$, have received much attention. It has been shown that a length-$n$ string $S$ over an alphabet of size $\sigma$ can be represented within the…

数据结构与算法 · 计算机科学 2023-11-10 Tomasz Kociumaka , Gonzalo Navarro , Francisco Olivares

We describe a data structure that supports access, rank and select queries, as well as symbol insertions and deletions, on a string $S[1,n]$ over alphabet $[1..\sigma]$ in time $O(\lg n/\lg\lg n)$, which is optimal even on binary sequences…

数据结构与算法 · 计算机科学 2013-02-04 Gonzalo Navarro , Yakov Nekrich

A palindromic substring $T[i.. j]$ of a string $T$ is said to be a shortest unique palindromic substring (SUPS) in $T$ for an interval $[p, q]$ if $T[i.. j]$ is a shortest palindromic substring such that $T[i.. j]$ occurs only once in $T$,…

数据结构与算法 · 计算机科学 2023-08-30 Takuya Mieno , Mitsuru Funakoshi

Given a string $S$ of length $n$, the classic string indexing problem is to preprocess $S$ into a compact data structure that supports efficient subsequent pattern queries. In the \emph{deterministic} variant the goal is to solve the string…

数据结构与算法 · 计算机科学 2016-12-07 Philip Bille , Inge Li Gørtz , Frederik Rye Skjoldjensen

We revisit two well-known algorithmic problems on strings: computing a shortest unique substring (SUS) and a shortest absent substring (SAS) of a string $S$ of length $n$. Both problems admit folklore $\mathcal{O}(n)$-time solutions using…

数据结构与算法 · 计算机科学 2026-05-07 Panagiotis Charalampopoulos , Manal Mohamed , Solon P. Pissis , Hilde Verbeek , Wiktor Zuba

We present the first solution to $\tau$-majorities on tree paths. Given a tree of $n$ nodes, each with a label from $[1..\sigma]$, and a fixed threshold $0<\tau<1$, such a query gives two nodes $u$ and $v$ and asks for all the labels that…

数据结构与算法 · 计算机科学 2018-09-10 Travis Gagie , Meng He , Gonzalo Navarro

Let $\mathcal{P}$ be a set of $h$ pairwise-disjoint polygonal obstacles with a total of $n$ vertices in the plane. We consider the problem of building a data structure that can quickly compute an $L_1$ shortest obstacle-avoiding path…

计算几何 · 计算机科学 2014-03-17 Danny Z. Chen , Rajasekhar Inkulu , Haitao Wang

The choice dictionary is introduced as a data structure that can be initialized with a parameter $n\in\mathbb{N}=\{1,2,\ldots\}$ and subsequently maintains an initially empty subset $S$ of $\{1,\ldots,n\}$ under insertion, deletion,…

数据结构与算法 · 计算机科学 2017-03-17 Torben Hagerup , Frank Kammer

For a text given in advance, the substring minimal suffix queries ask to determine the lexicographically minimal non-empty suffix of a substring specified by the location of its occurrence in the text. We develop a data structure answering…

数据结构与算法 · 计算机科学 2016-02-01 Tomasz Kociumaka

A Random Access query to a string $T\in [0..\sigma)^n$ asks for the character $T[i]$ at a given position $i\in [0..n)$. In $O(n\log\sigma)$ bits of space, this fundamental task admits constant-time queries. While this is optimal in the…

数据结构与算法 · 计算机科学 2026-05-13 Anouk Duyster , Tomasz Kociumaka

We give a near-optimal quantum algorithm for the longest common substring (LCS) problem between two run-length encoded (RLE) strings, with the assumption that the prefix-sums of the run-lengths are given. Our algorithm costs…

量子物理 · 物理学 2024-11-06 Tzu-Ching Lee , Han-Hsuan Lin

Big data, encompassing extensive datasets, has seen rapid expansion, notably with a considerable portion being textual data, including strings and texts. Simple compression methods and standard data structures prove inadequate for…

数据结构与算法 · 计算机科学 2024-11-11 Takaaki Nishimoto , Yasuo Tabei

Let $\mathcal{D}$ be a collection of $D$ documents, which are strings over an alphabet of size $\sigma$, of total length $n$. We describe a data structure that uses linear space and and reports $k$ most relevant documents that contain a…

数据结构与算法 · 计算机科学 2013-08-02 Gonzalo Navarro , Yakov Nekrich

We devise a data structure that can answer shortest path queries for two query points in a polygonal domain $P$ on $n$ vertices. For any $\varepsilon > 0$, the space complexity of the data structure is $O(n^{10+\varepsilon })$ and queries…

计算几何 · 计算机科学 2024-02-22 Sarita de Berg , Tillmann Miltzow , Frank Staals

The Suffix Array $SA_S[1\ldots n]$ of an $n$-length string $S$ is a lexicographically sorted array of the suffixes of $S$. The suffix array is one of the most well known and widely used data structures in string algorithms. We present a…

数据结构与算法 · 计算机科学 2021-12-24 Amihood Amir , Itai Boneh

Given a string $S$ of length $N$ on a fixed alphabet of $\sigma$ symbols, a grammar compressor produces a context-free grammar $G$ of size $n$ that generates $S$ and only $S$. In this paper we describe data structures to support the…

数据结构与算法 · 计算机科学 2014-08-15 Djamal Belazzougui , Simon J. Puglisi , Yasuo Tabei