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Nanoporous materials have attracted significant interest as an emerging platform for adsorption-related applications. The high-throughput computational screening became a standard technique to access the performance of thousands of…

We apply a number of atomic decomposition schemes across the standard QM7 dataset -- a small model set of organic molecules at equilibrium geometry -- to inspect the possible emergence of trends among contributions to atomization energies…

化学物理 · 物理学 2023-04-19 Frederik Ø. Kjeldal , Janus J. Eriksen

Charge density is central to density functional theory (DFT), as it fully defines the ground-state properties of a material system. Obtaining it with high accuracy is a computational bottleneck. Existing machine learning models are…

材料科学 · 物理学 2025-09-30 Xuejian Qin , Taoyuze Lv , Zhicheng Zhong

We study alchemical atomic energy partitioning as a method to estimate atomisation energies from atomic contributions which are defined in physically rigorous and general ways through use of the uniform electron gas as a joint reference. We…

In the past two decades, geometric phases have provided a powerful new way of looking at quantum mechanical systems, manifesting themselves in subtle but observable ways. Here, we use them to define a versatile function ("distribution of…

材料科学 · 物理学 2007-05-23 Joydeep Bhattacharjee , Shobhana Narasimhan , Umesh V Waghmare

Machine-learning models in chemistry - when based on descriptors of atoms embedded within molecules - face essential challenges in transferring the quality of predictions of local electronic structures and their associated properties across…

化学物理 · 物理学 2024-09-27 Frederik Ø. Kjeldal , Janus J. Eriksen

The recently proposed Partition Theory (PT) [J.Phys.Chem.A 111, 2229 (2007)] is illustrated on a simple one-dimensional model of a heteronuclear diatomic molecule. It is shown that a sharp definition for the charge of molecular fragments…

其他凝聚态物理 · 物理学 2016-09-28 Morrel H. Cohen , Adam Wasserman , Roberto Car , Kieron Burke

The average ionization state is a critical parameter in plasma models for charged particle transport, equation of state, and optical response. The dynamical or nonadiabatic Born effective charge (NBEC), calculated via first principles…

材料科学 · 物理学 2025-03-07 Vidushi Sharma , Alexander J. White

Based on an analysis of the short range chemical environment of each atom in a system, standard machine learning based approaches to the construction of interatomic potentials aim at determining directly the central quantity which is the…

材料科学 · 物理学 2015-08-05 S. Alireza Ghasemi , Albert Hofstetter , Santanu Saha , Stefan Goedecker

Partial atomic charges are a useful and intuitive concept for understanding molecular properties and chemical reaction mechanisms, showing how changes in molecular geometry can affect the flow of electronic charge within a molecule.…

化学物理 · 物理学 2022-01-14 Ryan J. MacDonell , Serguei Patchkovskii , Michael S. Schuurman

Based on thermodynamic integration we introduce atoms in molecules (AIM) using the orbital-free framework of alchemical perturbation density functional theory (APDFT). Within APDFT, atomic energies and electron densities in molecules are…

化学物理 · 物理学 2020-06-15 Guido Falk von Rudorff , O. Anatole von Lilienfeld

The distribution of local charge excesses (DLC) in metallic alloys, previously obtained as a result of the analysis of order N electronic structure calculations, is derived from a variational principle. A phenomenological Charge Excess…

材料科学 · 物理学 2007-05-23 Ezio Bruno , Leon Zingales , Yang Wang

The issues raised in the comment by T.A. Manz are addressed through the presentation of calculated atomic charges for NaF, NaCl, MgO, SrTiO$_3$ and La$_2$Ce$_2$O$_7$, using our previously presented method for calculating Hirshfeld-I charges…

材料科学 · 物理学 2013-11-15 D. E. P. Vanpoucke , I. Van Driessche , P. Bultinck

Atomic partial charges are crucial parameters in molecular dynamics (MD) simulation, dictating the electrostatic contributions to intermolecular energies, and thereby the potential energy landscape. Traditionally, the assignment of partial…

机器学习 · 计算机科学 2024-05-09 Yuanqing Wang , Iván Pulido , Kenichiro Takaba , Benjamin Kaminow , Jenke Scheen , Lily Wang , John D. Chodera

Data-driven schemes that associate molecular and crystal structures with their microscopic properties share the need for a concise, effective description of the arrangement of their atomic constituents. Many types of models rely on…

机器学习 · 统计学 2022-06-08 Jigyasa Nigam , Sergey Pozdnyakov , Guillaume Fraux , Michele Ceriotti

Energy degeneracy in physical systems may be induced by symmetries of the Hamiltonian, and the resonance of degeneracy states in carbon nanostructures can effectively enhance the stability of the system. Combining the octet rule, we…

介观与纳米尺度物理 · 物理学 2025-04-18 Chang-Chun He , Shao-Gang Xu , Jiarui Zeng , Weijie Huang , Yao Yao , Yu-Jun Zhao , Hu Xu

The calculation of electron density distribution using density functional theory (DFT) in materials and molecules is central to the study of their quantum and macro-scale properties, yet accurate and efficient calculation remains a…

计算物理 · 物理学 2024-05-15 Teddy Koker , Keegan Quigley , Eric Taw , Kevin Tibbetts , Lin Li

The electronic charge density plays a central role in determining the behavior of matter at the atomic scale, but its computational evaluation requires demanding electronic-structure calculations. We introduce an atom-centered,…

The study shows how to define "exactly" the average ion charge $Z_{\rm I}$ in the electron-ion model for plasmas and liquid metals: this definition comes out of the condition that a plasma consisting of electrons and nuclei can be described…

统计力学 · 物理学 2016-05-04 Junzo Chihara

Quantum--Mechanical methods that are both computationally fast and accurate are not yet available for electronic excitations having charge transfer character. In this work, we present a significant step forward towards this goal for those…

化学物理 · 物理学 2015-06-12 Michele Pavanello , Troy Van Voorhis , Lucas Visscher , Johannes Neugebauer
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