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Divergence between populations for a given trait can be driven by natural or sexual selection, interacting with migration behaviour. Mating preference for different phenotypes can lead to the emergence and persistence of differentiated…

种群与进化 · 定量生物学 2018-01-25 Charline Smadi , Helene Leman , Violaine Llaurens

Dominance is usually considered a constant value that describes the relative difference in fitness or phenotype between heterozygotes and the average of homozygotes at a focal polymorphic locus. However, the observed dominance can vary with…

种群与进化 · 定量生物学 2023-12-05 Juan Li , Claudia Bank

Large sets of genotypes give rise to the same phenotype because phenotypic expression is highly redundant. Accordingly, a population can accept mutations without altering its phenotype, as long as thegenotype mutates into another one on the…

种群与进化 · 定量生物学 2015-02-18 Susanna Manrubia , José A. Cuesta

The relationship between network topology and system dynamics has significant implications for unifying our understanding of the interplay among metabolic, gene-regulatory, and ecosystem network architecures. Here we analyze the stability…

种群与进化 · 定量生物学 2015-06-17 Cameron Smith , Raymond S. Puzio , Aviv Bergman

Social networks exhibit strikingly systematic patterns across a wide range of human contexts. While genetic variation accounts for a significant portion of the variation in many complex social behaviors, the heritability of egocentric…

基因组学 · 定量生物学 2009-02-11 James H. Fowler , Christopher T. Dawes , Nicholas A. Christakis

Coexistence of individuals with different species or phenotypes is often found in nature in spite of competition between them. Stable coexistence of multiple types of individuals have implications for maintenance of ecological biodiversity…

无序系统与神经网络 · 物理学 2007-05-23 Naoki Masuda , Norio Konno

Genetic regulatory networks are defined by their topology and by a multitude of continuously adjustable parameters. Here we present a class of simple models within which the relative importance of topology vs. interaction strengths becomes…

分子网络 · 定量生物学 2013-08-02 Mikhail Tikhonov , William Bialek

Evolution on neutral networks of genotypes has been found in models to concentrate on genotypes with high mutational robustness, to a degree determined by the topology of the network. Here analysis is generalized beyond neutral networks to…

种群与进化 · 定量生物学 2015-09-01 Lee Altenberg

The interaction between natural selection and random mutation is frequently debated in recent years. Does similar dilemma also exist in the evolution of real networks such as biological networks? In this paper, we try to discuss this issue…

统计力学 · 物理学 2009-01-07 Zhen Shao , Hai-jun Zhou

The mutual influence of dynamics and structure is a central issue in complex systems. In this paper we study by simulation slow evolution of network under the feedback of a local-majority-rule opinion process. If performance-enhancing local…

物理与社会 · 物理学 2009-11-13 Zhen Shao , Haijun Zhou

Geographic structure can affect patterns of genetic differentiation and speciation rates. In this article, we investigate the dynamics of genetic distances in a geographically structured metapopulation. We model the metapopulation as a…

种群与进化 · 定量生物学 2020-02-25 Verónica Miró Pina , Emmanuel Schertzer

Natural selection and random drift are competing phenomena for explaining the evolution of populations. Combining a highly fit mutant with a population structure that improves the odds that the mutant spreads through the whole population…

种群与进化 · 定量生物学 2009-08-14 Valmir C. Barbosa , Raul Donangelo , Sergio R. Souza

The dynamics of gene regulatory networks are often modeled with the assumption of cellular homogeneity. However, this assumption contradicts the plethora of experimental results in a variety of systems, which designates that cell…

种群与进化 · 定量生物学 2017-08-23 Panagiotis Chrysinas , Michail E. Kavousanakis , Andreas G. Boudouvis

Rapidly mutating pathogens may be able to persist in the population and reach an endemic equilibrium by escaping hosts' acquired immunity. For such diseases, multiple biological, environmental and population-level mechanisms determine the…

In environments that vary frequently and unpredictably, bet-hedgers can overtake the population. Diversifying bet-hedgers have a diverse set of offspring so that, no matter the conditions they find themselves in, at least some offspring…

种群与进化 · 定量生物学 2023-07-06 Csenge Petak , Lapo Frati , Melissa H. Pespeni , Nick Cheney

A classic measure of ecological stability describes the tendency of a community to return to equilibrium after small perturbation. While many advances show how the network structure of these communities severely constrains such tendencies,…

种群与进化 · 定量生物学 2015-06-09 Gang Yan , Neo D. Martinez , Yang-Yu Liu

Boolean networks have been proposed as potentially useful models for genetic control. An important aspect of these networks is the stability of their dynamics in response to small perturbations. Previous approaches to stability have assumed…

分子网络 · 定量生物学 2015-05-13 Andrew Pomerance , Edward Ott , Michelle Girvan , Wolfgang Losert

We consider a model for a population in a heterogeneous environment, with logistic type local population dynamics, under the assumption that individuals can switch between two different nonzero rates of diffusion. Such switching behavior…

偏微分方程分析 · 数学 2020-01-14 Robert Stephen Cantrell , Chris Cosner , Xiao Yu

The recent discovery of universal principles underlying many complex networks occurring across a wide range of length scales in the biological world has spurred physicists in trying to understand such features using techniques from…

生物物理 · 物理学 2015-05-13 Sitabhra Sinha

Ecosystems are formed by networks of species and their interactions. Traditional models of such interactions assume a constant interaction strength between a given pair of species. However, there is often significant trait variation among…

种群与进化 · 定量生物学 2022-05-03 Zachary Jackson , BingKan Xue
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