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The maintenance of diversity, the `commonness of rarity', and compositional turnover are ubiquitous features of species-rich communities. Through a minimal model, we consider how these features reflect the interplay between environmental…

种群与进化 · 定量生物学 2025-12-04 Emil Mallmin , Arne Traulsen , Silvia De Monte

The composition of ecological communities varies not only between different locations but also in time. Understanding the fundamental processes that drive species towards rarity or abundance is crucial to assessing ecosystem resilience and…

种群与进化 · 定量生物学 2024-11-22 Emil Mallmin , Arne Traulsen , Silvia De Monte

Species interactions (ranging from direct predator prey relationships to indirect effects mediated by the environment) are central to ecosystem balance and biodiversity. While empirical methods for measuring these interactions exist, their…

种群与进化 · 定量生物学 2025-08-27 Javier Aguilar , Samir Suweis , Amos Maritan , Sandro Azaele

Ecologists are interested in understanding and predicting how ecological communities change through time. While it might seem natural to measure this through changes in species' abundances, computational limitations mean transitions between…

定量方法 · 定量生物学 2014-04-01 William D. Pearse , Andy Purvis , David B. Roy , Alexandros Stamatakis

Natural ecosystems, in particular on the microbial scale, are inhabited by a large number of species. The population size of each species is affected by interactions of individuals with each other and by spatial and temporal changes in…

种群与进化 · 定量生物学 2023-06-23 Tom Burkart , Jan Willeke , Erwin Frey

We present new theoretical and empirical results on the probability distributions of species persistence times in natural ecosystems. Persistence times, defined as the timespans occurring between species' colonization and local extinction…

种群与进化 · 定量生物学 2012-03-21 S. Suweis , E. Bertuzzo , L. Mari , I. Rodriguez-Iturbe , A. Maritan , A. Rinaldo

Community assembly is studied using individual-based multispecies models. The models have stochastic population dynamics with mutation, migration, and extinction of species. Mutants appear as a result of mutation of the resident species,…

种群与进化 · 定量生物学 2010-05-18 Yohsuke Murase , Takashi Shimada , Nobuyasu Ito , Per Arne Rikvold

Many complex adaptive systems contain a large diversity of specialized components. The specialization at the level of the microscopic degrees of freedom, and diversity at the level of the system as a whole are phenomena that appear during…

adap-org · 物理学 2007-05-23 Vivek S. Borkar , Sanjay Jain , Govindan Rangarajan

Over the last few decades, ecologists have come to appreciate that key ecological patterns, which describe ecological communities at relatively large spatial scales, are not only scale dependent, but also intimately intertwined. The…

种群与进化 · 定量生物学 2016-09-13 Fabio Peruzzo , Sandro Azaele

The behavior of interacting populations typically displays irregular temporal and spatial patterns that are difficult to reconcile with an underlying deterministic dynamics. A classical example is the heterogeneous distribution of plankton…

种群与进化 · 定量生物学 2009-11-13 M. H. Vainstein , J. M. Rubi , J. M. G. Vilar

Ecosystems often undergo abrupt regime shifts in response to gradual external changes. These shifts are theoretically understood as a regime switch between alternative stable states of the ecosystem dynamical response to smooth changes in…

种群与进化 · 定量生物学 2015-02-18 Jose A. Capitan , Jose A. Cuesta

A major challenge for community ecology is using spatio-temporal data to infer parameters of dynamical models without conducting laborious experiments. We present a novel framework from statistical physics -- Maximum Caliber -- to…

种群与进化 · 定量生物学 2025-11-07 Zachary Jackson , Mathew A. Leibold , Robert D. Holt , BingKan Xue

Ecological communities are composed of species interactions that respond to environmental fluctuations. Despite increasing evidence of temporal variation in these interactions, most theoretical frameworks remain rooted in static…

The distributions of species lifetimes and species in space are related, since species with good local survival chances have more time to colonize new habitats and species inhabiting large areas have higher chances to survive local…

种群与进化 · 定量生物学 2019-02-18 Tobias Rogge , David Jones , Barbara Drossel , Korinna T. Allhoff

Ecosystems tend to fluctuate around stable equilibria in response to internal dynamics and environmental factors. Occasionally, they enter an unstable tipping region and collapse into an alternative stable state. Our understanding of how…

Ecological networks are theoretical abstractions that represent ecological communities. These networks are usually defined as static entities, in which the occurrence of a particular interaction between species is considered fixed despite…

种群与进化 · 定量生物学 2016-04-12 Daniela N. Lopez , Patricio A. Camus , Nelson Valdivia , Sergio A. Estay

Evolutionary transitions among ecological interactions are widely known, although their detailed dynamics remain absent for most population models. Adaptive dynamics has been used to illustrate how the parameters of population models might…

种群与进化 · 定量生物学 2022-11-14 Luciano Stucchi , Javier Galeano , Juan Manuel Pastor , José María Iriondo , José A. Cuesta

Understanding the stability of complex communities is a central focus in ecology, many important theoretical advancements have been made to identify drivers of ecological stability. However, previous results often rely on the…

种群与进化 · 定量生物学 2025-04-04 Shuaiying Wang , Yuguang Yang , Aming Li

Effects of externally imposed periodic changes in the environment on population dynamics are studied with the help of a simple model. The environmental changes are represented by the temporal and spatial dependence of the competition terms…

适应与自组织系统 · 物理学 2009-11-10 M. Ballard , V. M. Kenkre , M. N. Kuperman

Animals form groups for many reasons but there are costs and benefit associated with group formation. One of the benefits is collective memory. In groups on the move, social interactions play a crucial role in the cohesion and the ability…

定量方法 · 定量生物学 2014-03-24 Giancarlo De Luca , Patrizio Mariani , Brian R. MacKenzie , Matteo Marsili
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