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Enterotoxigenic Escherichia coli (ETEC) are a major cause of diarrhea worldwide, and infection of children in underdeveloped countries often leads to high mortality rates. Isolated ETEC express a plethora of colonization factors…

生物物理 · 物理学 2015-05-20 Narges Mortezaei , Bhupender Singh , Johan Zakrisson , Esther Bullitt , Magnus Andersson

The near-surface swimming patterns of bacteria are strongly determined by the hydrodynamic interactions between bacteria and the surface, which trap bacteria in smooth circular trajectories that lead to inefficient surface exploration.…

Uropathogenic Escherichia coli (UPEC) express various kinds of organelles, so-called pili or fimbriae, that mediate adhesion to host tissue in the urinary tract through specific receptor-adhesin interactions. The biomechanical properties of…

Hydrodynamics and confinement dominate bacterial mobility near solid or air-water boundaries, causing flagellated bacteria to move in circular trajectories. This phenomenon results from the counter-rotation between the bacterial body and…

生物物理 · 物理学 2018-10-09 George Araujo , Weijie Chen , Sridhar Mani , Jay X. Tang

The ability of uropathogenic Escherichia coli (UPEC) to cause urinary tract infections is dependent on their ability to colonize the uroepithelium. Infecting bacteria ascend the urethra to the bladder and then kidneys by attaching to the…

生物物理 · 物理学 2014-11-07 Erik Fallman , Magnus Andersson , Staffan Schedin , Jana Jass , Bernt Eric Uhlin , Ove Axner

Type 1 fimbriae mediate adhesion of uropathogenic Escherichia coli (UPEC) to host cells. It has been hypothesized that fimbriae can, by their ability to uncoil under exposure to force, reduce fluid shear stress on the adhesin-receptor…

生物物理 · 物理学 2015-06-23 Johan Zakrisson , Krister Wiklund , Ove Axner , Magnus Andersson

The type 1 pilus is a bacterial filament consisting of a long coiled proteic chain of subunits joined together by non-covalent bonding between complementing $\beta$-strands. Its strength and structural stability are critical for its…

Peritrichously-flagellated bacteria, such as Escherichia coli, self-propel in fluids by using specialised motors to rotate multiple helical filaments. The rotation of each motor is transmitted to a short flexible segment called the hook…

生物物理 · 物理学 2018-06-07 Emily E. Riley , Debasish Das , Eric Lauga

Collective behavior of bacterial colonies plays critical roles in adaptability, survivability, biofilm expansion and infection. We employ an individual-based model of an interstitial biofilm to study emergent pattern formation based on the…

适应与自组织系统 · 物理学 2017-02-01 Cameron Zachreson , Christian Wolff , Cynthia B. Whitchurch , Milos Toth

Shiga toxin-producing Escherichia coli O157: H7 is a food-borne pathogen and the major cause of hemorrhagic colitis. Pseudomonas is the genus most frequent psychrotrophic spoilage microorganisms present in milk. Two-species bacterial…

种群与进化 · 定量生物学 2019-05-08 E. J. Quinto , J. M. Marin , I. Caro , J. Mateo , D. W. Schaffner

Peritrichous bacteria such as Escherichia coli swim in viscous fluids by forming a helical bundle of flagellar filaments. The filaments are spatially distributed around the cell body to which they are connected via a flexible hook. To…

生物物理 · 物理学 2019-06-19 Kenta Ishimoto , Eric Lauga

Flagellar-driven locomotion plays a critical role in bacterial attachment and colonization of surfaces, contributing to the risks of contamination and infection. Tremendous attempts to uncover the underlying principles governing bacterial…

软凝聚态物质 · 物理学 2025-02-19 Xin-Xin Xu , Yangguang Tian , Yuhe Pu , Bingchen Che , Hao Luo , Yanan Liu , Yan-Jun Liu , Guangyin Jing

Bacteriophages are promising alternative antimicrobial agents due to their high specificity for host bacteria and minimal immunogenicity in humans. However, their therapeutic application is limited by their nature as biological entities,…

定量方法 · 定量生物学 2024-12-30 Hyunjin Shim

The entrapment of bacteria near boundary surfaces is of biological and practical importance, yet the underlying physics is still not well understood. We demonstrate that it is crucial to include a commonly neglected entropic effect arising…

软凝聚态物质 · 物理学 2023-07-28 Premkumar Leishangthem , Xinliang Xu

When treated with antibiotics below the minimum inhibitory concentration, bacterial cell division turns off, but cell growth does not. Thus, rod-like bacteria, including E. coli, can elongate many times their length without increasing their…

软凝聚态物质 · 物理学 2026-03-11 Richard Z. DeCurtis , Yongtae Ahn , Jane E. Hill , Sara M. Hashmi

Microswimmers such as E. Coli bacteria accumulate and exhibit an intriguing dynamics near walls, governed by hydrodynamic and steric interactions. Insight into the underlying mechanisms and predominant interactions demand a detailed…

软凝聚态物质 · 物理学 2020-07-03 S. Mahdiyeh Mousavi , Gerhard Gompper , Roland G. Winkler

A human pathogen, \textit{Neisseria gonorrhoeae} (NG), moves on surfaces by attaching and retracting polymeric structures called Type IV pili. The \textit{tug-of-war} between the pili results in a two-dimensional stochastic motion called…

生物物理 · 物理学 2017-11-29 Konark Bisht , Stefan Klumpp , Varsha Banerjee , Rahul Marathe

We unravel how functional plasticity and redundancy are essential mechanisms underlying the ability to survive of metabolic networks. We perform an exhaustive computational screening of synthetic lethal reaction pairs in Escherichia coli in…

分子网络 · 定量生物学 2015-06-17 Oriol Güell , Francesc Sagués , M. Ángeles Serrano

Bacterial motility, and in particular repulsion or attraction towards specific chemicals, has been a subject of investigation for over 100 years, resulting in detailed understanding of bacterial chemotaxis and the corresponding sensory…

生物物理 · 物理学 2022-06-08 Jerko Rosko , Vincent Martinez , Wilson Poon , Teuta Pilizota

We quantitatively study the transport of E. coli near the walls of confined microfluidic channels, and in more detail along the edges formed by the interception of two perpendicular walls. Our experiments establish the connection between…

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