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Recently, several studies have investigated the transcription process associated to specific genetic regulatory networks. In this work, we present a stochastic approach for analyzing the dynamics and effect of negative feedback loops (FBL)…

分子网络 · 定量生物学 2007-08-20 J. C. Nacher , T. Ochiai

This paper studies exponential stability properties of a class of two-dimensional (2D) systems called differential repetitive processes (DRPs). Since a distinguishing feature of DRPs is that the problem domain is bounded in the "time"…

动力系统 · 数学 2017-10-16 Berk Altın , Kira Barton

Transcription factor binding sites vary in their specificity, both within and between species. Binding specificity has a strong impact on the evolution of gene expression, because it determines how easily regulatory interactions are gained…

种群与进化 · 定量生物学 2013-12-30 Alexander J. Stewart , Joshua B. Plotkin

The complete analysis of a model with three quartic coupling constants associated with an O(2N)--symmetric, a cubic, and a tetragonal interactions is carried out within the three-loop approximation of the renormalization-group (RG) approach…

凝聚态物理 · 物理学 2009-10-30 Andrei Mudrov , Konstantin Varnashev

Impedance-based stability analysis is appealing in the case of Single-Input Single-Output (SISO) systems. However, in the case of grid-tied voltage source converter (VSC) systems, dq impedances of source and load (VSC) subsystems are…

系统与控制 · 计算机科学 2017-03-14 Chen Zhang , Xu Cai , Atle Rygg , Marta Molinas

Boolean networks have been proposed as potentially useful models for genetic control. An important aspect of these networks is the stability of their dynamics in response to small perturbations. Previous approaches to stability have assumed…

分子网络 · 定量生物学 2015-05-13 Andrew Pomerance , Edward Ott , Michelle Girvan , Wolfgang Losert

A field-theoretic description of the critical behaviour of the weakly disordered systems is given. Directly, for three- and two-dimensional systems a renormalization analysis of the effective Hamiltonian of model with replica symmetry…

无序系统与神经网络 · 物理学 2009-10-31 V. V. Prudnikov , P. V. Prudnikov , A. A. Fedorenko

This paper investigates the local asymptotic stabilization of a very general class of instable autonomous nonlinear difference equations which are subject to perturbed dynamics which can have a different order that that of the nominal…

动力系统 · 数学 2011-08-02 M. De La Sen

The interactions between proteins, DNA, and RNA in living cells constitute molecular networks that govern various cellular functions. To investigate the global dynamical properties and stabilities of such networks, we studied the cell-cycle…

分子网络 · 定量生物学 2009-11-10 Fangting Li , Tao Long , Ying Lu , Qi Ouyang , Chao Tang

Modern power system is undergoing a paradigm shift from the synchronous generators-based system to the power electronics converters-dominated system. With the high penetration of converters, serious stability problems are provoked,…

应用物理 · 物理学 2022-03-02 Haoxiang Zong , Chen Zhang , Xu Cai , Marta Molinas

The nucleotide sequence representation of DNA can be inadequate for resolving protein-DNA binding sites and regulatory substrates, such as those involved in gene expression and horizontal gene transfer. Considering that sequence-like…

基因组学 · 定量生物学 2020-07-30 Jan Zrimec

Gene Regulatory Networks(GRNs) with feedback are essential components of many cellular processes and may exhibit oscillatory behavior. Analyzing such systems becomes increasingly complex as the number of components increases. Since gene…

分子网络 · 定量生物学 2026-04-22 Manuel Eduardo Hernández-García , Jorge Velázquez-Castro

We model the phase oscillations of electrons in race-track microtrons by means of an area preserving map with a fixed point at the origin, which represents the synchronous trajectory of a reference particle in the beam. We study the…

动力系统 · 数学 2023-09-19 Yu. A. Kubyshin , O. Larreal , R. Ramírez-Ros , T. M. Seara

The stability of a complex system generally decreases with increasing system size and interconnectivity, a counterintuitive result of widespread importance across the physical, life, and social sciences. Despite recent interest in the…

种群与进化 · 定量生物学 2020-05-20 A. Bradley Duthie

The common understanding of protein evolution has been that neutral or slightly deleterious mutations are fixed by random drift, and evolutionary rate is determined primarily by the proportion of neutral mutations. However, recent studies…

种群与进化 · 定量生物学 2015-12-31 Sanzo Miyazawa

We present a design framework to induce stable oscillations through mixed feedback control. We provide conditions on the feedback gain and on the balance between positive and negative feedback contributions to guarantee robust oscillations.…

系统与控制 · 电气工程与系统科学 2023-05-09 Weiming Che , Fulvio Forni

*Automated circuit discovery* is a central tool in mechanistic interpretability for identifying the internal components of neural networks responsible for specific behaviors. While prior methods have made significant progress, they…

机器学习 · 计算机科学 2026-02-20 Itamar Hadad , Guy Katz , Shahaf Bassan

Understanding which system structure can sustain stable dynamics is a fundamental step in the design and analysis of large scale dynamical systems. Towards this goal, we investigate here the structural stability of systems with a random…

组合数学 · 数学 2020-03-26 Mohamed Ali Belabbas , Artur Kirkoryan

We introduce a novel framework for the stability analysis of discrete-time linear switching systems with switching sequences constrained by an automaton. The key element of the framework is the algebraic concept of multinorm, which…

动力系统 · 数学 2016-04-22 Matthew Philippe , Ray Essick , Geir Dullerud , Raphaël M. Jungers

This paper develops a unified analytical framework for determinant identities under finite-rank perturbations of square matrices that remains valid without invertibility assumptions. In contrast to classical inverse-based formulations, the…

最优化与控制 · 数学 2026-04-07 Robert Vrabel