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相关论文: Universality in stochastic exponential growth

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Protein variability in single cells has been studied extensively in populations, but little is known about temporal protein fluctuations in a single cell over extended times. We present here traces of protein copy number measured in…

生物物理 · 物理学 2015-06-16 Naama Brenner , Erez Braun , Anna Yoney , Lee Susman , James Rotella , Hanna Salman

We present an application of the theory of stochastic processes to model and categorize non-equilibrium physical phenomena. The concepts of uniformly continuous probability measures and modular evolution lead to a systematic hierarchical…

数学物理 · 物理学 2009-08-18 Enrique Hernandez-Lemus , Jesus K. Estrada-Gil

Many stochastic complex systems are characterized by the fact that their configuration space doesn't grow exponentially as a function of the degrees of freedom. The use of scaling expansions is a natural way to measure the asymptotic growth…

统计力学 · 物理学 2020-04-15 Jan Korbel , Rudolf Hanel , Stefan Thurner

Measurements of cell size dynamics have established the adder principle as a robust mechanism of cell size homeostasis. In this framework, cells add a nearly constant amount of size during each cell cycle, independent of their size at…

定量方法 · 定量生物学 2026-01-01 Sayeh Rezaee , Cesar Nieto , Abhyudai Singh

Cells achieve size homeostasis by regulating their division timing based on their size, added size, and cell cycle time. Previous research under steady-state conditions demonstrated the robustness of these mechanisms. However, their dynamic…

定量方法 · 定量生物学 2025-12-01 Cesar Nieto , Sayeh Rezaee , Cesar Augusto Vargas-Garcia , Abhyudai Singh

Explanation of exponential growth in self-reproduction is an important step toward elucidation of the origins of life because optimization of the growth potential across rounds of selection is necessary for Darwinian evolution. To produce…

细胞行为 · 定量生物学 2018-04-18 Atsushi Kamimura , Kunihiko Kaneko

Modeling the evolution of a financial index as a stochastic process is a problem awaiting a full, satisfactory solution since it was first formulated by Bachelier in 1900. Here it is shown that the scaling with time of the return…

统计金融 · 定量金融 2009-11-13 Attilio L. Stella , Fulvio Baldovin

A recent burst of dynamic single-cell growth-division data makes it possible to characterize the stochastic dynamics of cell division control in bacteria. Different modeling frameworks were used to infer specific mechanisms from such data,…

细胞行为 · 定量生物学 2017-03-22 Jacopo Grilli , Matteo Osella , Andrew S. Kennard , Marco Cosentino Lagomarsino

Stochastic models of surface growth are usually based on randomly choosing a substrate site to perform iterative steps, as in the etching model [1]. In this paper I modify the etching model to perform sequential, instead of random,…

统计力学 · 物理学 2017-07-19 Bernardo A. Mello

One of the most challenging problems in microbiology is to understand how a small fraction of microbes that resists killing by antibiotics can emerge in a population of genetically identical cells, the phenomenon known as persistence or…

亚细胞过程 · 定量生物学 2015-06-17 Andrea Rocco , Andrzej M. Kierzek , Johnjoe McFadden

We consider an infinite-dimensional stochastic clustering model on $\mathbb{R}$. In discrete time, each point of a unit-intensity simple point process moves halfway toward either of its left or right neighbors, chosen uniformly at random.…

概率论 · 数学 2026-03-10 Partha S. Dey , S. Rasoul Etesami , Aditya S. Gopalan

We introduce two stochastic chemostat models consisting in a coupled population-nutrient process reflecting the interaction between the nutrient and the bacterias in the chemostat with finite volume. The nutrient concentration evolves…

概率论 · 数学 2012-06-19 Pierre Collet , Servet Martinez , Sylvie Meleard , Jaime San Martin

We propose a stochastic model for evolution. Births and deaths of species occur with constant probabilities. Each new species is associated with a fitness sampled from the uniform distribution on [0,1]. Every time there is a death event…

概率论 · 数学 2010-11-09 Herve Guiol , Fabio P. Machado , Rinaldo B. Schinazi

The paper examines stochastic diffusion within an expanding space-time framework. It starts with providing a rationale for the considered model and its motivation from cosmology where the expansion of space-time is used in modelling various…

概率论 · 数学 2023-12-22 Philip Broadbridge , Illia Donhauzer , Andriy Olenko

It is shown that, by imposing reparametrization invariance, one may derive a variety of stochastic equations describing the dynamics of surface growth and identify the physical processes responsible for the various terms. This approach…

凝聚态物理 · 物理学 2009-10-28 M. Marsili , A. Maritan , F. Toigo , J. R. Banavar

A one-dimensional cellular automaton with a probabilistic evolution rule can generate stochastic surface growth in $(1 + 1)$ dimensions. Two such discrete models of surface growth are constructed from a probabilistic cellular automaton…

统计力学 · 物理学 2015-06-25 Pratip Bhattacharyya

Within a continuous-time, stochastic model of single-cell size homeostasis, we study how the structure of feedback from size to growth rates and cell-cycle progression shapes overall size dynamics, both within and across cell cycles. We…

细胞行为 · 定量生物学 2025-12-10 Ethan Levien , Jessica Rattray

The dynamics of cellular aggregates is driven by the interplay of mechanochemical processes and cellular activity. Although deterministic models may capture mechanical features, local chemical fluctuations trigger random cell responses,…

软凝聚态物质 · 物理学 2024-01-17 Ana Carpio , Elena Cebrian

We model the growth of a cell population using a piecewise deterministic Markov branching tree. In this model, each cell splits into two offspring at a division rate $B(x)$, which depends on its size $x$. The size of each cell increases…

概率论 · 数学 2024-09-06 Nathalie Krell

An individual-based model of stochastic branching is proposed and studied, in which point particles drift in $\bar{\mathds{R}}_{+}:=[0,+\infty)$ towards the origin (edge) with unit speed, where each of them splits into two particles that…

动力系统 · 数学 2019-10-30 Yuri Kozitsky