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Gene regulatory networks can be successfully modeled as Boolean networks. A much discussed hypothesis says that such model networks reproduce empirical findings the best if they are tuned to operate at criticality, i.e. at the borderline…

分子网络 · 定量生物学 2016-10-12 Pablo Villegas , José Ruiz-Franco , Jorge Hidalgo , Miguel A. Muñoz

Time-discrete dynamical systems on a finite state space have been used with great success to model natural and engineered systems such as biological networks, social networks, and engineered control systems. They have the advantage of being…

组合数学 · 数学 2015-03-17 Alan Veliz-Cuba , Reinhard Laubenbacher

The branching process is the minimal model for propagation dynamics, avalanches and criticality, broadly used in neuroscience. A simple extension of it, adding inhibitory nodes, induces a much-richer phenomenology, including, an…

统计力学 · 物理学 2022-07-08 Roberto Corral López , Victor Buendía , Miguel A. Muñoz

When viewed at a certain coarse grain, the brain seems a relatively small dynamical system composed by a few dozen interacting areas, performing a number of stereotypical behaviors. It is known that, even relatively small dynamical systems…

神经元与认知 · 定量生物学 2015-06-26 Dante R. Chialvo

We investigate states of enhanced activity in a biological neuronal network composed of pulse-coupled oscillators. The synaptic couplings between the neurons are dynamic, modeling spike time dependent plasticity. The network exhibits…

无序系统与神经网络 · 物理学 2012-08-17 Daniel Ritterskamp , Rudolf Friedrich

Highly correlated brain dynamics produces synchronized states with no behavioral value, while weakly correlated dynamics prevent information flow. In between these states, the unique dynamical features of the critical state endow the brain…

神经元与认知 · 定量生物学 2012-10-16 Dante R. Chialvo

The research concerns the dynamics of complex autonomous Kauffman networks. The article defines and shows using simulation experiments half-chaotic networks, which exhibit features much more similar to typically modeled systems like a…

适应与自组织系统 · 物理学 2022-01-14 Andrzej Gecow

We systematically investigate the intricate interplay between short-range fermion-fermion interactions and disorder scatterings beneath the superconducting dome of noncentrosymmetric nodal-line superconductors. Employing the renormalization…

超导电性 · 物理学 2024-07-17 Wen-Hao Bian , Jing Wang

Cortical network functioning critically depends on finely tuned interactions to afford neuronal activity propagation over long distances while avoiding runaway excitation. This importance is highlighted by the pathological consequences and…

神经元与认知 · 定量生物学 2022-10-12 Christian Meisel

We study patterns of partial synchronization in a network of FitzHugh-Nagumo oscillators with empirical structural connectivity measured in human subjects. We report the spontaneous occurrence of synchronization phenomena that closely…

适应与自组织系统 · 物理学 2021-02-03 M. Gerster , R. Berner , J. Sawicki , A. Zakharova , A. Škoch , J. Hlinka , K. Lehnertz , E. Schöll

Criticality is hypothesized as a physical mechanism underlying efficient transitions between cortical states and remarkable information processing capacities in the brain. While considerable evidence generally supports this hypothesis,…

神经元与认知 · 定量生物学 2023-06-12 Yang Tian , Zeren Tan , Hedong Hou , Guoqi Li , Aohua Cheng , Yike Qiu , Kangyu Weng , Chun Chen , Pei Sun

Many social, biological, and economic systems can be approached by complex networks of interacting units. The behaviour of several models on small-world networks has recently been studied. These models are expected to capture the essential…

统计力学 · 物理学 2009-11-07 Alejandro D. Sanchez , Juan M. Lopez , Miguel A. Rodriguez

The cerebral cortex spontaneously displays different patterns of activity that evolve over time according to the brain state. Sleep, wakefulness, resting states, and attention are examples of a wide spectrum of physiological states that can…

Networks of coupled neural systems represent an important class of models in computational neuroscience. In some applications it is required that equilibrium points in these networks remain stable under parameter variations. Here we present…

无序系统与神经网络 · 物理学 2007-05-23 Wilson A. Truccolo , Govindan Rangarajan , Yonghong Chen , Mingzhou Ding

Brain networks are typically represented by adjacency matrices, where each node corresponds to a brain region. In traditional brain network analysis, nodes are assumed to be matched across individuals, but the methods used for node matching…

统计方法学 · 统计学 2025-03-21 Martin Cole , Yang Xiang , Will Consagra , Anuj Srivastava , Xing Qiu , Zhengwu Zhang

We consider an idealized network, formed by N neurons individually described by the FitzHugh-Nagumo equations and connected by electrical synapses. The limit for N to infinity of the resulting discrete model is thoroughly investigated, with…

神经元与认知 · 定量生物学 2013-07-11 Claudio Canuto , Anna Cattani

The ability to effectively control brain dynamics holds great promise for the enhancement of cognitive function in humans, and the betterment of their quality of life. Yet, successfully controlling dynamics in neural systems is challenging,…

定量方法 · 定量生物学 2018-08-29 Evelyn Tang , Danielle S. Bassett

Networks of randomly connected neurons are among the most popular models in theoretical neuroscience. The connectivity between neurons in the cortex is however not fully random, the simplest and most prominent deviation from randomness…

神经元与认知 · 定量生物学 2018-07-09 Daniel Martí , Nicolas Brunel , Srdjan Ostojic

Full scale simulations of neuronal network models of the brain are challenging due to the high density of connections between neurons. This contribution reports run times shorter than the simulated span of biological time for a full scale…

分布式、并行与集群计算 · 计算机科学 2022-10-04 Anno C. Kurth , Johanna Senk , Dennis Terhorst , Justin Finnerty , Markus Diesmann

The dynamical organization in the presence of noise of a Boolean neural network with random connections is analyzed. For low levels of noise, the system reaches a stationary state in which the majority of its elements acquire the same…

无序系统与神经网络 · 物理学 2007-05-23 Cristian Huepe , Maximino Aldana