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Although Turing pattern is one of the most universal mechanisms for pattern formation, in its standard model the number of stripes changes with the system size, since the wavelength of the pattern is invariant: It fails to preserve the…

细胞行为 · 定量生物学 2007-05-23 Shuji Ishihara , Kunihiko Kaneko

Background and Purpose: Biopsy is the main determinants of glioma clinical management, but require invasive sampling that fail to detect relevant features because of tumor heterogeneity. The purpose of this study was to evaluate the…

定量方法 · 定量生物学 2019-08-08 Emily E Diller , Sha Cao , Beth Ey , Robert Lober , Jason G Parker

B cells develop high affinity receptors during the course of affinity maturation, a cyclic process of mutation and selection. At the end of affinity maturation, a number of cells sharing the same ancestor (i.e. in the same "clonal family")…

生物大分子 · 定量生物学 2018-11-21 Amrit Dhar , Kristian Davidsen , Frederick A. Matsen , Vladimir N. Minin

We measure the dynamical mechanical properties of human red blood cells. Single cell response is measured with optical tweezers. We investigate both the stress relaxation following a fast deformation, and the effect of varying the strain…

软凝聚态物质 · 物理学 2009-11-13 Young-Zoon Yoon , Jurij Kotar , Gilwon Yoon , Pietro Cicuta

The emergence of spatial patterns and organized growth is a hallmark of developing tissues. While symmetry-breaking and scaling laws govern these processes, how cells coordinate spatial patterning with size regulation remains unclear. Here,…

This paper deals with the derivation of a collective model of cell populations out of an individual-based description of the underlying physical particle system. By looking at the spatial distribution of cells in terms of time-evolving…

数学物理 · 物理学 2014-11-12 Annachiara Colombi , Marco Scianna , Andrea Tosin

Non-Hermitian systems show a non-Hermitian skin effect, where the bulk states are localized at a boundary of the systems with open boundary conditions. In this paper, we study dependence of the localization length of the eigenstates on a…

介观与纳米尺度物理 · 物理学 2021-10-13 Kazuki Yokomizo , Shuichi Murakami

Interacting, self-propelled particles such as epithelial cells can dynamically self-organize into complex multicellular patterns, which are challenging to classify without a priori information. Classically, different phases and phase…

定量方法 · 定量生物学 2021-01-19 Dhananjay Bhaskar , William Y. Zhang , Ian Y. Wong

Understanding the structure of the human T-cell receptor repertoire is a crucial precondition to understand the ability of the immune system to recognize and respond to antigens. T-cells are often compared via the complementarity…

分子网络 · 定量生物学 2021-12-14 Paul Richter

The efficient recognition of pathogens by the adaptive immune system relies on the diversity of receptors displayed at the surface of immune cells. T-cell receptor diversity results from an initial random DNA editing process, called VDJ…

种群与进化 · 定量生物学 2015-04-28 Yuval Elhanati , Anand Murugan , Curtis G. Callan , Thierry Mora , Aleksandra M. Walczak

The non-Hermitian skin effect can lead to directional amplification of response, with the associated end-to-end Green's function generally exhibiting size dependence. Any deviation in length or local disorder can drastically alter the…

量子物理 · 物理学 2026-05-01 Kunling Zhou , Zihe Yang , Bowen Zeng , Yong Hu

During an epidemic outbreak, individuals often modify their behavior in response to global prevalence cues, using spatially mediated adaptations such as reduced mobility or transmission range. In this work, we investigate the impact of…

物理与社会 · 物理学 2026-03-18 Akhil Panicker , Sasidevan V

Contrary to classical predictions, the optical response of few-nm plasmonic particles depends on particle size due to effects such as nonlocality and electron spill-out. Ensembles of such nanoparticles (NPs) are therefore expected to…

介观与纳米尺度物理 · 物理学 2016-06-17 Christos Tserkezis , Johan R. Maack , Zhaowei Liu , Martijn Wubs , N. Asger Mortensen

We consider a supercritical branching population, where individuals have i.i.d. lifetime durations (which are not necessarily exponentially distributed) and give birth (singly) at constant rate. We assume that individuals independently…

概率论 · 数学 2012-12-11 Nicolas Champagnat , Amaury Lambert

How does immune system evolve functional proteins - potent antibodies - in such a short time? We address this question using a microscopic, protein-level, sequence-based model of humoral immune response with explicitly defined interactions…

细胞行为 · 定量生物学 2008-05-27 Muyoung Heo , Konstantin B. Zeldovich , Eugene I. Shakhnovich

The asymmetrical inheritance of plasmid DNA, as well as other cellular components, has been shown to be involved in replicative aging. In Saccharomyces cerevisiae, there is an ongoing debate regarding the mechanisms underlying this…

亚细胞过程 · 定量生物学 2017-02-08 Jai Denton , Atiyo Ghosh , Tatiana T. Marquez-Lago

Accurately predicting immunotherapy response in Non-Small Cell Lung Cancer (NSCLC) remains a critical unmet need. Existing radiomics and deep learning-based predictive models rely primarily on pre-treatment imaging to predict categorical…

图像与视频处理 · 电气工程与系统科学 2025-05-30 Moinak Bhattacharya , Judy Huang , Amna F. Sher , Gagandeep Singh , Chao Chen , Prateek Prasanna

Pattern-diluted associative networks were introduced recently as models for the immune system, with nodes representing T-lymphocytes and stored patterns representing signalling protocols between T- and B-lymphocytes. It was shown earlier…

无序系统与神经网络 · 物理学 2015-04-17 Elena Agliari , Alessia Annibale , Adriano Barra , A. C. C. Coolen , Daniele Tantari

Multiple Sclerosis is a chronic autoimmune disorder characterized by the degradation of the myelin sheath in the central nervous system, leading to neurological impairments. In this work, we analyze a reaction-diffusion model derived from…

组织与器官 · 定量生物学 2026-03-10 Romina Travaglini , Rossella Della Marca

Localisation limits and nonlocal approximations of degenerate parabolic systems have experienced a renaissance in recent years. However, only few results cover anisotropic systems. This work addresses this gap by establishing the…

偏微分方程分析 · 数学 2024-12-31 Tomasz Dębiec , Markus Schmidtchen
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