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Dynamic lateral transport of lipids, proteins, and self-assembled structures in biomembranes plays crucial roles in diverse cellular processes. In this study, we perform a coarse-grained molecular dynamics simulation on a vesicle composed…

软凝聚态物质 · 物理学 2023-11-27 Hiroaki Ito , Naofumi Shimokawa , Yuji Higuchi

Lipid bilayer membranes are not uniform and clusters of lipids in a more ordered state exist within the generally disorder lipid milieu of the membrane. These clusters of ordered lipids microdomains are now referred to as lipid rafts.…

定量方法 · 定量生物学 2017-06-28 Melissa R. Adkins , Y. C. Zhou

Random lateral translocation of lipids and proteins is a universal process on membrane surfaces. Local aggregation or organization of lipids and proteins can be induced when this lateral random diffusion is mediated by the electrostatic…

定量方法 · 定量生物学 2015-06-03 Y. C. Zhou

Using a multi-phase field model, we examine how particle deformability, which is a proxy for cell stiffness, affects motility induced phase separation (MIPS). We show that purely repulsive deformable, i.e., squishy, cells phase separate…

软凝聚态物质 · 物理学 2025-02-12 Austin Hopkins , Benjamin Loewe , Michael Chiang , Davide Marenduzzo , M. Cristina Marchetti

Simulation of a multicomponent lipid bilayer having a fixed percentage of cholesterol is done to study phase transition leading to domain formation. The concept of random lattice has been used in simulation to account for the coupling…

软凝聚态物质 · 物理学 2015-06-25 Srilekha Banerjee , Jayashree Saha

This article summarizes a variety of physical mechanisms proposed in the literature, which can generate micro- and nanodomains in multicomponent lipid bilayers and biomembranes. It mainly focusses on lipid-driven mechanisms that do not…

生物物理 · 物理学 2016-11-16 Friederike Schmid

Dynamin is a ubiquitous GTPase that tubulates lipid bilayers and is implicated in many membrane severing processes in eukaryotic cells. Setting the grounds for a better understanding of this biological function, we develop a generalized…

软凝聚态物质 · 物理学 2008-08-19 Martin Lenz , Jacques Prost , Jean-François Joanny

Living cells are characterized by the micrometric confinement of various macromolecules at high concentrations. Using droplets containing binary polymer blends as artificial cells, we previously showed that cell-sized confinement causes…

Dendritic spines are small membranous structures that protrude from the neuronal dendrite. Each spine contains a synaptic contact site that may connect its parent dendrite to the axons of neighboring neurons. Dendritic spines are markedly…

生物物理 · 物理学 2015-11-02 Karsten Miermans , Remy Kusters , Casper Hoogenraad , Cornelis Storm

Membrane organization is essential for cellular functions such as signal transduction and membrane trafficking. A major challenge is to understand the lateral heterogeneous structures in membranes and membrane fluidity in the presence of…

软凝聚态物质 · 物理学 2007-11-09 Chun-Lai Ren , Yu-qiang Ma

Membrane curvature sensing is essential for a diverse range of biological processes. Recent experiments have revealed that a single nanometer-sized septin protein can distinguish between membrane-coated glass beads of one micron and three…

生物物理 · 物理学 2024-07-22 Indrajit Badvaram , Brian A. Camley

Cells use homeostatic mechanisms to maintain an optimal composition of distinct types of phospholipids in cellular membranes. The hydrophilic dipolar layer at the membrane interface, composed of phospholipid headgroups, regulates the…

软凝聚态物质 · 物理学 2021-07-13 Hanne S. Antila , Anika Wurl , O. H. Samuli Ollila , Markus S. Miettinen , Tiago M. Ferreira

Contraction of the cytokinetic ring during cell division leads to physical partitioning of a eukaryotic cell into two daughter cells. This involves flows of actin filaments and myosin motors in the growing membrane interface at the…

生物物理 · 物理学 2022-02-21 Mainak Chatterjee , Arkya Chatterjee , Amitabha Nandi , Anirban Sain

In this work, we study in detail the distribution of stochastic forces generated by the molecular motors activity, in the actin cortex of pre-muscular cells. By combining active and passive rheology experiments, performed on the same…

生物物理 · 物理学 2019-12-10 P. Bohec , J. Tailleur , F. van Wijland , A. Richert , F. Gallet

We perform simulations of a system containing simple model proteins and a polymer representing chromatin. We study the interplay between protein-protein and protein-chromatin interactions, and the resulting condensates which arise due to…

软凝聚态物质 · 物理学 2022-07-20 Marco Ancona , Chris A. Brackley

Membranes containing a wide variety of ternary mixtures of high chain-melting temperature lipids, low chain-melting temperature lipids, and cholesterol undergo lateral phase separartion into coexisting liquid phases at a miscibility…

The spatial organization of complex biochemical reactions is essential for the regulation of cellular processes. Membrane-less structures called foci containing high concentrations of specific proteins have been reported in a variety of…

The crawling motility of many eukaryotic cells is driven by filamentous actin (F-actin), and regulated by a network of signaling proteins and lipids (including small GTPases). The tangle of positive and negative feedback loops gives rise to…

细胞行为 · 定量生物学 2026-02-10 Jack M. Hughes , Jupiter Algorta , Leah Edelstein-Keshet

We report the self-assembly of thin actin shells beneath the membranes of giant vesicles. Ion-carrier mediated influx of Mg2+ induces actin polymerization in the initially spherical vesicles. Buckling of the vesicles and the formation of…

生物物理 · 物理学 2015-06-26 W. Hackl , M. Barmann , E. Sackmann

Phase separation of a liquid mixture embedded within an elastic network is relevant to a wide range of natural and industrial systems, including biomolecular condensates interacting with the cytoskeleton, structural colouring in bird…

软凝聚态物质 · 物理学 2025-08-14 Oliver W. Paulin , Yicheng Qiang , David Zwicker
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